DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and sig-7

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_492343.2 Gene:sig-7 / 172664 WormBaseID:WBGene00000890 Length:427 Species:Caenorhabditis elegans


Alignment Length:155 Identity:63/155 - (40%)
Similarity:92/155 - (59%) Gaps:9/155 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 VVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSIW 548
            |::.||.||:.:.||.||.|:...||....|..|||.:.||.:.:.::.|||||||||.||:|::
 Worm     3 VLIETTLGDLIIDLFVKERPRCSLNFLKLCKKKYYNLNQFHSIERNYVAQTGDPTGTGKGGESVY 67

  Fly   549 -------GSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPT-PWLDNKHTVFGRVYRG 605
                   |..|:.|.:|.::|.|...||..|.|.|..|||||||:... .:||::||:||:|..|
 Worm    68 SDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEG 132

  Fly   606 MEVVLNICNSKANPKTDKPYDDIKI 630
            :| .|...|.:.....::|:.||:|
 Worm   133 LE-TLEKLNEQLADTNNRPFKDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 62/154 (40%)
sig-7NP_492343.2 cyclophilin_RRM 4..169 CDD:238902 62/154 (40%)
RRM_PPIL4 238..320 CDD:409681
Blue background indicates that the domain is not in the aligned region.

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