DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and ppwd1

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_002934239.3 Gene:ppwd1 / 100488042 XenbaseID:XB-GENE-1001509 Length:640 Species:Xenopus tropicalis


Alignment Length:634 Identity:367/634 - (57%)
Similarity:483/634 - (76%) Gaps:9/634 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDKTKEDLKRSAPEEENEPQEESVSSEKEAEGEEDAWIGPMPSEQSAPAPAKKKKVLPYEHIYLE 66
            |..:......|:..|:..|::.......|   .|:.|:||||:|.|   ..||:|||.:|.:||:
 Frog    11 SSSSSSSSSSSSSSEDEVPEKRRCEQNDE---PEEGWVGPMPAEAS---HNKKRKVLEFERVYLD 69

  Fly    67 NLPNAESYERSYMHRDVITHLVCTKTDFVVTASLDGHIKFWKKGELGIEFVKHFRSHLVPIKSLT 131
            |||:|..|||||||||||||:|||||:|::|.|.|||:|||||.|.||||||||||||..|:|:.
 Frog    70 NLPSASMYERSYMHRDVITHIVCTKTEFIITGSHDGHVKFWKKVEEGIEFVKHFRSHLGVIESIA 134

  Fly   132 TNDSGTLLCSAATDQTAKVFDVVNFDMINIIRLGYTPQCSEWINGPGDAVQALAISDSESSRIHI 196
            .:..|.|||:...||..||||||||||||::|||:.|..||||..||||:.|:|.|:..:.:|.:
 Frog   135 ASAEGALLCTVGDDQAMKVFDVVNFDMINMLRLGFHPGQSEWIYCPGDAISAVACSEKSTGKIFV 199

  Fly   197 YDGQGGGEALHTLEKLHSAPVVAMCLNVAMETVISVDRNGILEYWQNSKYDYKFPQRLVNFDSKL 261
            |||:|..:.:|..:||||:|:..:.||...:.|:|.|::|::|||......||||.. |:::.|.
 Frog   200 YDGRGDNKPMHVFDKLHSSPLTTIRLNAIYKVVVSSDKSGMIEYWTGPPRGYKFPNN-VSWEFKT 263

  Fly   262 DTSLFEFAKQKTQVTGLAATPDGKRFAAISTDRKVRVFQFNTGKLIRVFDEALSTYTQMQQTKHA 326
            ||.|:||||.|..:|.::.:||||:.|.:.:|||||:|:|.||||:|||||:||.:|::||.|..
 Frog   264 DTDLYEFAKCKANLTSISFSPDGKKMATVGSDRKVRIFRFLTGKLMRVFDESLSMFTELQQMKQQ 328

  Fly   327 LPNMEFGRRMAAERDLEKTAQNATLNILFDSTGNFLLYPTMLGIKVINVVTNRCVTILGKTDNIR 391
            ||:||||||||.||:|||......:||:||.||:|:||.||||||||||.|||||.||||.:|||
 Frog   329 LPDMEFGRRMAVERELEKVDAMKLMNIIFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIR 393

  Fly   392 PLQVALFQGRIKRQKAAITMEQEASENPALQNILNDPTAFCTAYKKSRFYLYSRRLPSDLQ--DV 454
            .:|:|:|||..|:.:||.|:|.:||:||.|..:..|||..|||:||:|||::::|.|.|.:  :.
 Frog   394 AMQLAVFQGVAKKHRAATTVEMKASDNPVLLAVQPDPTIVCTAFKKNRFYVFTKREPEDTKSAES 458

  Fly   455 DRDIFNEKPSKEDIIAVPEASVVQRIYENVVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYN 519
            |||:||||||||:::|..:|...:|:.::.::||:.||||::||..|.||||||||||::|||||
 Frog   459 DRDVFNEKPSKEEVMAATQAEGSKRVSDSAIIHTSMGDIHVKLFPVECPKTVENFCVHSRNGYYN 523

  Fly   520 GHIFHRVIKGFMVQTGDPTGTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFI 584
            .|:|||||||||:|||||||||.||:||||.:|:|||..:|:||||||:|||||||:|||||||:
 Frog   524 RHMFHRVIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHATLRHDRPYTLSMANAGPSTNGSQFFL 588

  Fly   585 TVLPTPWLDNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKIISI 633
            ||:|||||||||||||||.:|||||..|||||.||||||||:||.||:|
 Frog   589 TVVPTPWLDNKHTVFGRVTKGMEVVQRICNSKVNPKTDKPYEDISIINI 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201 130/236 (55%)
WD40 <79..300 CDD:295369 117/220 (53%)
WD40 repeat 85..122 CDD:293791 27/36 (75%)
WD40 repeat 128..176 CDD:293791 27/47 (57%)
WD40 repeat 181..210 CDD:293791 9/28 (32%)
WD40 repeat 218..268 CDD:293791 18/49 (37%)
WD40 repeat 275..311 CDD:293791 19/35 (54%)
cyclophilin_WD40 485..633 CDD:238908 113/147 (77%)
ppwd1XP_002934239.3 WD40 83..312 CDD:421866 123/229 (54%)
WD40 repeat 88..125 CDD:293791 27/36 (75%)
WD40 repeat 131..169 CDD:293791 21/37 (57%)
WD40 repeat 177..213 CDD:293791 14/35 (40%)
WD40 repeat 221..266 CDD:293791 16/45 (36%)
cyclophilin_WD40 489..637 CDD:238908 113/147 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 258 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9099
Inparanoid 1 1.050 779 1.000 Inparanoid score I519
OMA 1 1.010 - - QHG54581
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 1 1.000 - - FOG0005501
OrthoInspector 1 1.000 - - oto105386
Panther 1 1.100 - - LDO PTHR45625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3351
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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