DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and ppwd1

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001092228.1 Gene:ppwd1 / 100000660 ZFINID:ZDB-GENE-070615-16 Length:622 Species:Danio rerio


Alignment Length:607 Identity:368/607 - (60%)
Similarity:470/607 - (77%) Gaps:7/607 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EAEGEEDAWIGPMPSEQSAPAPAKKKKVLPYEHIYLENLPNAESYERSYMHRDVITHLVCTKTDF 94
            |.:.:|:.|:||||||.:   ..||||||.:|.:||:|||:|..|||||||||||||:||:||||
Zfish    17 EEDEDEENWVGPMPSEAT---QTKKKKVLEFERLYLDNLPSASMYERSYMHRDVITHIVCSKTDF 78

  Fly    95 VVTASLDGHIKFWKKGE-LGIEFVKHFRSHLVPIKSLTTNDSGTLLCSAATDQTAKVFDVVNFDM 158
            ::|||.|||:|||||.| .|:||||||||||..|:.::.:..|.||||...||..||||||||||
Zfish    79 ILTASQDGHVKFWKKKEDEGVEFVKHFRSHLGVIECISVSAEGALLCSVGDDQAMKVFDVVNFDM 143

  Fly   159 INIIRLGYTPQCSEWINGPGDAVQALAISDSESSRIHIYDGQGGGEALHTLEKLHSAPVVAMCLN 223
            ||:::||:.|...|||..||||:..:|.|:..:.:|.:|||:|..:.||..||:|:.|:..:.||
Zfish   144 INMLKLGFHPGQCEWIYNPGDAISTIACSEKSTGKIFVYDGRGSNQPLHVFEKMHTTPLSQIRLN 208

  Fly   224 VAMETVISVDRNGILEYWQNSKYDYKFPQRLVNFDSKLDTSLFEFAKQKTQVTGLAATPDGKRFA 288
            .....::|.|:.|:||||.....::||| |.|:::.|.||.|:||||..|..|.||.:.|||:.|
Zfish   209 PKYRVIVSADKAGMLEYWTGLPSEFKFP-RQVDWEFKTDTDLYEFAKCGTYPTSLAFSQDGKKMA 272

  Fly   289 AISTDRKVRVFQFNTGKLIRVFDEALSTYTQMQQTKHALPNMEFGRRMAAERDLEKTAQNATLNI 353
            .|:.|||||:|:|.||||:|||||:|:.:|::||.:..||:||||||||.||:|||.......||
Zfish   273 TIAVDRKVRIFRFLTGKLMRVFDESLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNI 337

  Fly   354 LFDSTGNFLLYPTMLGIKVINVVTNRCVTILGKTDNIRPLQVALFQGRIKRQKAAITMEQEASEN 418
            :||.||:|:||.||||||||||.|||||.||||.:|||.:|::||||..|..:||.|:|.:||||
Zfish   338 IFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVVQLSLFQGVAKAMQAAPTIEMKASEN 402

  Fly   419 PALQNILNDPTAFCTAYKKSRFYLYSRRLPSDLQ--DVDRDIFNEKPSKEDIIAVPEASVVQRIY 481
            ||||:...|||.||||:||:|||::::|.|.|.:  |.||||||||||||:::|..:|...:|:.
Zfish   403 PALQSSDPDPTIFCTAFKKNRFYMFTKREPEDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVS 467

  Fly   482 ENVVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKS 546
            ::.::|||.||||::||..|.||||||||||::|||||||||||||||||:|||||||||.||:|
Zfish   468 DSAIIHTTMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHIFHRVIKGFMIQTGDPTGTGMGGES 532

  Fly   547 IWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLN 611
            |||.:|:|||..:|:||||||:|||||||.||||||||||:||||||||||||||..:|||||..
Zfish   533 IWGGEFEDEFHSTLRHDRPYTLSMANAGPGTNGSQFFITVVPTPWLDNKHTVFGRTSKGMEVVQR 597

  Fly   612 ICNSKANPKTDKPYDDIKIISI 633
            |.|.|.||||||||:||.||:|
Zfish   598 ISNIKVNPKTDKPYEDISIINI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201 129/237 (54%)
WD40 <79..300 CDD:295369 116/221 (52%)
WD40 repeat 85..122 CDD:293791 27/37 (73%)
WD40 repeat 128..176 CDD:293791 25/47 (53%)
WD40 repeat 181..210 CDD:293791 9/28 (32%)
WD40 repeat 218..268 CDD:293791 18/49 (37%)
WD40 repeat 275..311 CDD:293791 21/35 (60%)
cyclophilin_WD40 485..633 CDD:238908 114/147 (78%)
ppwd1NP_001092228.1 WD40 64..294 CDD:295369 122/230 (53%)
WD40 <64..287 CDD:225201 117/223 (52%)
WD40 repeat 69..107 CDD:293791 27/37 (73%)
WD40 repeat 112..161 CDD:293791 26/48 (54%)
WD40 repeat 167..195 CDD:293791 9/27 (33%)
WD40 repeat 202..253 CDD:293791 19/51 (37%)
WD40 repeat 259..302 CDD:293791 25/42 (60%)
cyclophilin_WD40 471..619 CDD:238908 114/147 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573860
Domainoid 1 1.000 360 1.000 Domainoid score I914
eggNOG 1 0.900 - - E1_KOG0882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9099
Inparanoid 1 1.050 771 1.000 Inparanoid score I522
OMA 1 1.010 - - QHG54581
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 1 1.000 - - FOG0005501
OrthoInspector 1 1.000 - - oto39738
orthoMCL 1 0.900 - - OOG6_102016
Panther 1 1.100 - - LDO PTHR45625
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4358
SonicParanoid 1 1.000 - - X3351
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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