DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and NEM1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_011867.1 Gene:NEM1 / 856393 SGDID:S000001046 Length:446 Species:Saccharomyces cerevisiae


Alignment Length:326 Identity:75/326 - (23%)
Similarity:122/326 - (37%) Gaps:73/326 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 VVKKRLR-----------KEGELLTKGDAILELSE------CIHTTVIKDMCADCGAD-----LR 163
            |:::|::           .|.||......|.:.||      |...|:.:.:..|..|.     .|
Yeast   125 VIERRVKHTDKRNRGSNASENELPVSSSNINDSSEKTNPKNCNLNTIPEAVEDDLNASDEIILQR 189

  Fly   164 QNENGQTSEA----SVPMVHTMPDLKVTQKLAQK--LGHDDTRRLLADRKLV------------L 210
            .|..|....|    |.|..::..:|.::...:..  .|.....|.|..:||:            |
Yeast   190 DNVKGSLLRAQSVKSRPRSYSKSELSLSNHSSSNTVFGTKRMGRFLFPKKLIPKSVLNTQKKKKL 254

  Fly   211 LVDLDQTVIHTTNDTVPDNIKGIYH-----FQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHIC 270
            ::|||:|:||:.:.:...:.....|     |.|.|..: .|....||....||.::|:.|:|.|.
Yeast   255 VIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRT-LYFIHKRPYCDLFLTKVSKWYDLIIF 318

  Fly   271 TFGARNYAHMIAQLLDPEGKF---FSHRILSRDECF------------NATSKTDNLKALFPNGD 320
            |...:.||..:...|  |..|   ||.|.. |.:|.            ......:|.|....:.|
Yeast   319 TASMKEYADPVIDWL--ESSFPSSFSKRYY-RSDCVLRDGVGYIKDLSIVKDSEENGKGSSSSLD 380

  Fly   321 SMVCIIDDREDVWNM-ASNLIQVKPYHFFQHTGD-INAPPGLS--KHELDGEGVDFKEITEKHGD 381
            .:: |||:....:.| ..|.|||:.:.......| :|..|.|.  ::..|...:    :..|||:
Yeast   381 DVI-IIDNSPVSYAMNVDNAIQVEGWISDPTDTDLLNLLPFLEAMRYSTDVRNI----LALKHGE 440

  Fly   382 K 382
            |
Yeast   441 K 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 6/31 (19%)
FCP1_euk 202..348 CDD:131304 45/178 (25%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
NEM1NP_011867.1 FCP1 9..446 CDD:227517 75/326 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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