DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and TIM50

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_015262.1 Gene:TIM50 / 856042 SGDID:S000005984 Length:476 Species:Saccharomyces cerevisiae


Alignment Length:220 Identity:52/220 - (23%)
Similarity:80/220 - (36%) Gaps:63/220 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 RKLVLLVDLDQTVIHTTNDTVPDNIKGIYHFQLYGPHSPW-----YHTRLRPGTAEFLERMSQLY 265
            |.|.|::.|:..::                      ||.|     :.|..|||...||..:||.|
Yeast   190 RPLTLVITLEDFLV----------------------HSEWSQKHGWRTAKRPGADYFLGYLSQYY 232

  Fly   266 ELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGD-SMVCIIDDR 329
            |:.:.:.....|:..||:.|||...|.|:.:......:.......:|..|  |.| |.|.|||..
Yeast   233 EIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKL--NRDLSKVIIIDTD 295

  Fly   330 EDVWNM-ASNLIQVKP-----------------YHFFQHTGDINAPPGLSKHELDGEGVDFKEIT 376
            .:.:.: ..|.|.::|                 |...|.|.|:.  |.|:..|      |.|.:.
Yeast   296 PNSYKLQPENAIPMEPWNGEADDKLVRLIPFLEYLATQQTKDVR--PILNSFE------DKKNLA 352

  Fly   377 EKHGDKDKTESSSEVKPEDTDKGDN 401
            |:...:.|       |.:|...||:
Yeast   353 EEFDHRVK-------KLKDKFYGDH 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245
FCP1_euk 202..348 CDD:131304 38/165 (23%)
PRK08581 373..>530 CDD:236304 7/29 (24%)
BRCT_CTDP1 578..674 CDD:349361
TIM50NP_015262.1 NIF 193..339 CDD:397254 39/169 (23%)
Blue background indicates that the domain is not in the aligned region.

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