DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fcp1 and PSR2

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_013119.1 Gene:PSR2 / 850706 SGDID:S000004009 Length:397 Species:Saccharomyces cerevisiae


Alignment Length:343 Identity:73/343 - (21%)
Similarity:114/343 - (33%) Gaps:102/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIPDEEGATPSRAPGG---------VAASGAAEGDDGGGGSGAKNSASGN----------SNNNT 48
            |....:|......|.|         :..|.:..|.:.|..:..:|..|||          |||  
Yeast    39 NKAQTQGRKQKATPNGDKMQYSTPEILLSSSDSGSNAGSKTMQENGNSGNGKLAPLSRDHSNN-- 101

  Fly    49 SGGGIIVLRAALGENEARAVINKWRVREGQFVSAAQILFLYQPVGVDAKDAKDAGKPGGDCAIQR 113
                      :..|.:.....|:..|...:..:|.           :.::..|..|...|..:..
Yeast   102 ----------SYDEEKEYEDYNEGDVEMTEVNNAG-----------EEEEEDDEAKEKQDHVVHE 145

  Fly   114 YK--SQRAGVVKKRLRKEGELLTKGDAILELSECIHTTVIKDMCADCGADLRQNENG---QTSEA 173
            |.  :.|...:......:..|...|.              :||.....|....|:..   .|.|.
Yeast   146 YNVDADRNSSINDEAPPQQGLYQVGQ--------------EDMNPQYVASSPDNDLNLIPTTEED 196

  Fly   174 SVPMVHTMPDLKVTQKLAQKLGHDDTRRLLA------DRKLVLLVDLDQTVIHTTND-------- 224
            ...:.|..||    |..|.  |:|   .||.      .:|..|::|||:|::|::..        
Yeast   197 FSDLTHLQPD----QYHAP--GYD---TLLPPKLQEFQQKKCLILDLDETLVHSSFKYMHSADFV 252

  Fly   225 ---TVPDNIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLD 286
               .:.|.:..:|..:             |||..|||.|:|||||:.:.|.....||:.:...||
Yeast   253 LPVEIDDQVHNVYVIK-------------RPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLD 304

  Fly   287 PEGKFFSHRILSRDECFN 304
            |.|..  |..|.|:.|:|
Yeast   305 PNGTI--HHRLFREACYN 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 11/84 (13%)
FCP1_euk 202..348 CDD:131304 35/120 (29%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
PSR2NP_013119.1 FCP1 5..397 CDD:227517 73/343 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.