DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and TIM50

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_175986.2 Gene:TIM50 / 842040 AraportID:AT1G55900 Length:376 Species:Arabidopsis thaliana


Alignment Length:435 Identity:76/435 - (17%)
Similarity:132/435 - (30%) Gaps:165/435 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PSRAPGGVAASGAAEGDDGGGGSGAKNSASGNSNNNTSGGGIIVLRAALGENEARA------VIN 70
            |...|..|.|:.||              |:|.........|..:|.|..|...|..      .|:
plant    58 PPPPPPQVEAAAAA--------------ATGKERKGLKYLGYALLWALTGATAATGYASFAYTID 108

  Fly    71 KWRVREGQFVSAAQILFLYQPVGVDAKD-----AKDAGKPGGDCAIQRYKSQRAGVVKKRLRKEG 130
            :...:...|..:|....:.:..|:|..|     ...|...|...||.:|                
plant   109 EVNEKTKAFRESATKTPVIKSSGIDVIDKYQTKLYSAAMTGSARAIDKY---------------- 157

  Fly   131 ELLTKGDAILELSECIHTTVIKDMCADCGADLRQNENGQTSEASVPMVHTMPDLKVTQKLAQKLG 195
                     |||.|.:...|                .|.|...|..:   :|||...::      
plant   158 ---------LELREIVEEQV----------------KGFTEPLSEKL---LPDLHPAEQ------ 188

  Fly   196 HDDTRRLLADRKLVLLVDLDQTVIHTTNDTVPDNIKGIYHFQLYGPHSPW-----YHTRLRPGTA 255
                      ....|::||::|:::|                      .|     :.|..|||..
plant   189 ----------HVFTLVLDLNETLLYT----------------------DWKRERGWRTFKRPGVD 221

  Fly   256 EFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRI------LSRDECFNATSK--TDNL 312
            .|||.:.:.||:.:.:.....|...:.:.|||.| :..:::      ....:.:...||  .|..
plant   222 AFLEHLGKFYEIVVYSDQMEMYVLPVCEKLDPNG-YIRYKLARGATKYENGKHYRDLSKLNRDPK 285

  Fly   313 KALFPNGDSMVCIIDDREDVWNMASNLIQVKPYHFFQHTGDINAPPGLSKHELDGEG----VDFK 373
            |.||.:.::....:        ...|.:.:|||                |.|.|...    :.|.
plant   286 KILFVSANAFESTL--------QPENSVPIKPY----------------KLEADDTALVDLIPFL 326

  Fly   374 EITEKHGDKDKTESSSEVKPEDTDKGDNTVTSTSKDDDVNEESVD 418
            |...::       |.::::|         |.::.:..|:.:|.:|
plant   327 EYVARN-------SPADIRP---------VLASFERKDIAKEFID 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245 14/93 (15%)
FCP1_euk 202..348 CDD:131304 30/158 (19%)
PRK08581 373..>530 CDD:236304 7/46 (15%)
BRCT_CTDP1 578..674 CDD:349361
TIM50NP_175986.2 NIF 191..338 CDD:397254 36/200 (18%)
Blue background indicates that the domain is not in the aligned region.

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