DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and CPL2

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001190199.1 Gene:CPL2 / 831743 AraportID:AT5G01270 Length:774 Species:Arabidopsis thaliana


Alignment Length:602 Identity:123/602 - (20%)
Similarity:189/602 - (31%) Gaps:254/602 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 RLRPGTAEFLERMS----QLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDE--CFNATS 307
            :|||...|....::    :.:|:::||...|:||..:.:|||||....|.:.| ||.  |....:
plant   257 KLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKEL-RDRIVCVKPDA 320

  Fly   308 KTDNLKALFPNG---DSMVCIIDDREDVW-----------------------------------N 334
            | .:|.::|..|   ..|..:||||..||                                   |
plant   321 K-KSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVSAYLPYYAPQAETALVVPHLCVARN 384

  Fly   335 MASNLIQVKPYHF---------------------------------------FQHTGDINAPPGL 360
            :|.|   |:.|.|                                       |...|:|||||  
plant   385 VACN---VRGYFFKEFDESLMSSISLVYYEDDVENLPPSPDVSNYVVIEDPGFASNGNINAPP-- 444

  Fly   361 SKHELDGEGVDFKEITEK--------HGDKDKTESSSEVKPEDTDKGDNTVTSTSKDDDVNEESV 417
                 ..||:...|:..:        |.....| |::|.|||           |.|         
plant   445 -----INEGMCGGEVERRLNQAAAADHSTLPAT-SNAEQKPE-----------TPK--------- 483

  Fly   418 DVFEIEGDAKDPEV----SNASSATEAPKEPRDK--LNGKTNAEDIVVIDDSSSGSPDAEKAASD 476
                       |::    :|||:||.|...|..|  |.|....:....   |..|.|...:...|
plant   484 -----------PQIAVIPNNASTATAAALLPSHKPSLLGAPRRDGFTF---SDGGRPLMMRPGVD 534

  Fly   477 GEDVVVIDDN-SKESTKAEVPPTPAEKNEVVASSTTSP------DEKRPS--------------- 519
                 :.:.| ::....|::|..|.      :||..||      ||.|||               
plant   535 -----IRNQNFNQPPILAKIPMQPP------SSSMHSPGGWLVDDENRPSFPGRPSGLYPSQFPH 588

  Fly   520 ---ADADVATTSKTPSLRAPLEGQKQIEIED----------------PDDYLL------------ 553
               ..|.|...:....||:     :::.::|                ..::|:            
plant   589 GTPGSAPVGPFAHPSHLRS-----EEVAMDDDLKRQNPSRQTTEGGISQNHLVSNGREHHTDGGK 648

  Fly   554 ------YLEV-ILRNIHKRFYSIYDETTEIPDLKVIVPKIRSEVLRGKNLVFSGLVPTQMKLEQS 611
                  :|.| .|:.|.:|..|..:..|.|...|.:  :...|||.....:..|:..|:....|.
plant   649 SNGGQSHLFVSALQEIGRRCGSKVEFRTVISTNKEL--QFSVEVLFTGEKIGIGMAKTKKDAHQQ 711

  Fly   612 RAYFIAKSLGAEVKPNIDKEITHLVAVNAGTYKVNAAKKEPAIKVVNAN-WLWTCAERWEHVEEK 675
            .|....:||.       :|.:.|:..:...|      :|.|.    |.| :||..:|        
plant   712 AAENALRSLA-------EKYVAHVAPLARET------EKGPE----NDNGFLWESSE-------- 751

  Fly   676 LFPLDRKVRNKGRQPPA 692
                  .|.|||.:..|
plant   752 ------DVSNKGLEEEA 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 37/181 (20%)
COG5275 481..>658 CDD:227600 42/236 (18%)
BRCT 587..665 CDD:278934 18/78 (23%)
CPL2NP_001190199.1 HAD_like <255..348 CDD:304363 29/92 (32%)
dsrm 658..720 CDD:278464 15/63 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23081
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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