DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fcp1 and CPL1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_193898.3 Gene:CPL1 / 828254 AraportID:AT4G21670 Length:967 Species:Arabidopsis thaliana


Alignment Length:1027 Identity:189/1027 - (18%)
Similarity:317/1027 - (30%) Gaps:376/1027 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 QRAGVVKKRLRKEGELLTKGDAILELSE-----------CIHTTVIKDMCADCGADLRQNENGQT 170
            |:..|:|:|.:|:.|::......:.:|.           .|.||:     :.||...:...:...
plant    30 QQDDVMKQRKKKQREVMELAKMGIRISHFSQSGERCPPLAILTTI-----SSCGLCFKLEASPSP 89

  Fly   171 SEASVPMVHT--MPDLKVTQKLAQKLG------------------------------HDDTRRLL 203
            ::.|:.:.::  :.|.|....|   ||                              :|....:|
plant    90 AQESLSLFYSSCLRDNKTAVML---LGGEELHLVAMYSENIKNDRPCFWAFSVAPGIYDSCLVML 151

  Fly   204 ADRKLVLLVDLDQT-VIHTTNDTVPDNIKGIYHFQ------------------------------ 237
            ..|.|.::.|||:| |:..|..:..|.|.|   ||                              
plant   152 NLRCLGIVFDLDETLVVANTMRSFEDKIDG---FQRRINNEMDPQRLAVIVAEMKRYQDDKNLLK 213

  Fly   238 ------------------------LYGPHSPWYH-------------------------TRLRPG 253
                                    |...|.|...                         .|:||.
plant   214 QYIESDQVVENGEVIKVQSEIVPALSDNHQPLVRPLIRLQEKNIILTRINPMIRDTSVLVRMRPS 278

  Fly   254 TAEFLERMS----QLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDECFNATSKTDNLK 313
            ..|....::    :.:|:::||...|:||..:.:||||||... ::.:|:|..|..:..| .:|.
plant   279 WEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFK-KSLF 342

  Fly   314 ALFPNG---DSMVCIIDDREDVW----------------------------------NMA----- 336
            .:|.:|   ..|..:||||..||                                  |:|     
plant   343 NVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAAATPVLCVARNVACGVRG 407

  Fly   337 --------SNLIQVKPYHFFQHTGDINAPPGLS---------------KHELDGEGVDFKEITEK 378
                    |.|.::....:.....||.:||.:|               |..|..:|:...|:..:
plant   408 GFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERR 472

  Fly   379 HGDKDKTESSSEVKPEDTDKGDNTVTSTSKDDDVNEESVDV---FEIEGDAKDPEVSNASSATEA 440
            .  |:...:||.|.|  ....|..:.:..:....:..||.|   .::...|..|      ||...
plant   473 L--KEAISASSAVLP--AANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQP------SAMAF 527

  Fly   441 PKEPRDKLNGKTN-AEDIVVIDDSSSGSPDAEKA-----------------ASDGEDVVVIDDNS 487
            |..|..:....|: |:.:|..:.|...||..|:.                 ...|:|  ..|...
plant   528 PSIPFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQD--TRDPAP 590

  Fly   488 KESTKAEVPPTPAEKNEVVASSTTSPDEKRPSADADVATTSKTPSLRAPLEGQKQIEIEDPDDYL 552
            .|.:..:.||..|..:.|.:.:...|.|:    :.|.|...:..|...||           |..:
plant   591 SEPSFPQRPPVQAPPSHVQSRNGWFPVEE----EMDPAQIRRAVSKEYPL-----------DSEM 640

  Fly   553 LYLEVILRNIHKRFYSIYDETTEI---------PDLKVIVPK---IRSEVLRGKNLV-----FSG 600
            :::|. .|..|..|:|..|.:|:.         |      ||   .|.|.||..|.:     |.|
plant   641 IHMEK-HRPRHPSFFSKIDNSTQSDRMLHENRRP------PKESLRRDEQLRSNNNLPDSHPFYG 698

  Fly   601 LVPT--QMKLEQSRAYFIAKSLGAEVKPNIDKEITHLVAVNAGTYKVNAAKKEPAIKVVNANWLW 663
            ...:  |.....|...|:.:...:..:.:.|  :.|.:|:..|      ||.|....:|::..|.
plant   699 EDASWNQSSSRNSDLDFLPERSVSATETSAD--VLHGIAIKCG------AKVEYKPSLVSSTDLR 755

  Fly   664 TCAERW---EHVEEKLFPLDRKVRNKGRQPPAHCHSPEHVVNYSE---RSEISPSSSKQQEEQSG 722
            ...|.|   :.:.|.:        .|.|:...|..:...:.|.::   |:...|..|.:....  
plant   756 FSVEAWLSNQKIGEGI--------GKSRREALHKAAEASIQNLADGYMRANGDPGPSHRDATP-- 810

  Fly   723 NFRETLNPLLVFTNADIESMNKDYETFFESDSSSDEGPVNFENPPMDKKLLKRKREDDNSNRAHD 787
                       |||.:|...|.:  .......:.||..:...:.|.|.:|       :.|.|...
plant   811 -----------FTNENISMGNAN--ALNNQPFARDETALPVSSRPTDPRL-------EGSMRHTG 855

  Fly   788 FFTRSDDIMIGAPNLVEVDISSNEEADDNNEKEDDDDEMPSAKFRRGEDLPSDLELGSESNSEKE 852
            ..|.          |.|:..|...|                ..|:....||||:....|.:::.|
plant   856 SITA----------LRELCASEGLE----------------MAFQSQRQLPSDMVHRDELHAQVE 894

  Fly   853 PEDEDDGE-----W----------------NMMGAALE------REFLGLED 877
            .:....||     |                :|:|..|.      |.|.|:.:
plant   895 IDGRVVGEGVGSTWDEARMQAAERALSSVRSMLGQPLHKRQGSPRSFGGMSN 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 6/24 (25%)
FCP1_euk 202..348 CDD:131304 51/280 (18%)
COG5275 481..>658 CDD:227600 41/195 (21%)
BRCT 587..665 CDD:278934 19/84 (23%)
CPL1NP_193898.3 HAD_like <272..366 CDD:304363 29/94 (31%)
DSRM 730..790 CDD:214634 14/73 (19%)
DSRM 857..922 CDD:214634 15/90 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23081
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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