DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fcp1 and AT3G17550

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_188382.1 Gene:AT3G17550 / 821021 AraportID:AT3G17550 Length:296 Species:Arabidopsis thaliana


Alignment Length:293 Identity:78/293 - (26%)
Similarity:128/293 - (43%) Gaps:83/293 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SECIHTTVIKDMCADCGADLRQNENGQTSEASVPMVHTMPDLKVTQKLAQKLGHDD---TRRL-- 202
            |.|.|..|...:|..|.:.:.: .:|:..:..|            |.|  :|.|:.   |:|.  
plant    27 SSCGHWYVRYGVCIACKSTVNK-RHGRAFDYLV------------QGL--QLSHEAAAFTKRFTT 76

  Fly   203 ----LADRKLVLLVDLDQTVIHT--------TNDTVPDNIKGIYHFQLYGPHSPWYHTRLRPGTA 255
                |.::||.|::|||.|::|:        |...:.:.........|:...|. |.|:|||...
plant    77 QFYCLNEKKLNLVLDLDHTLLHSIRVSLLSETEKCLIEEACSTTREDLWKLDSD-YLTKLRPFVH 140

  Fly   256 EFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGD 320
            |||:..::|:.:::.|.|.|.||..:.:|:||:..:|..|:::|||  :...||.:|......| 
plant   141 EFLKEANELFTMYVYTMGTRVYAESLLKLIDPKRIYFGDRVITRDE--SPYVKTLDLVLAEERG- 202

  Fly   321 SMVCIIDDREDVW-NMASNLIQVKPYHFFQHTGDINAPP-----------------GLS------ 361
              |.|:||..||| :..|||:::..||||:    :|.|.                 ||:      
plant   203 --VVIVDDTSDVWTHHKSNLVEINEYHFFR----VNGPEESNSYTEEKRDESKNNGGLANVLKLL 261

  Fly   362 ----------KHELDGEGV-------DFKEITE 377
                      |.||:.:.|       |||.:|:
plant   262 KEVHYGFFRVKEELESQDVRFLLQEIDFKLLTK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245
FCP1_euk 202..348 CDD:131304 50/160 (31%)
PRK08581 373..>530 CDD:236304 2/5 (40%)
BRCT_CTDP1 578..674 CDD:349361
AT3G17550NP_188382.1 FCP1_euk 80..229 CDD:131304 50/154 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.