DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdspla

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_005162767.1 Gene:ctdspla / 751737 ZFINID:ZDB-GENE-060825-333 Length:276 Species:Danio rerio


Alignment Length:165 Identity:42/165 - (25%)
Similarity:72/165 - (43%) Gaps:40/165 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHTT-------NDTVPDNIK 231
            |.|..:.:|::.:...                .|..:::|||:|::|::       :..||..|.
Zfish    89 SPPAKYILPEVSINDY----------------GKNCVVIDLDETLVHSSFKPISNADFIVPVEID 137

  Fly   232 GIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRI 296
            |..| |:|        ...||...|||::|.:::|..:.|.....||..:|.|||..|.|.:.  
Zfish   138 GTVH-QVY--------VLKRPHVDEFLQKMGEMFECVLFTASLAKYADPVADLLDQWGVFRAR-- 191

  Fly   297 LSRDEC-FNATSKTDNLKALFPNGDSM--VCIIDD 328
            |.|:.| |:..:...:|..|   |..:  |.|:|:
Zfish   192 LFRESCVFHRGNYVKDLSRL---GRELNKVIIVDN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 39/137 (28%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ctdsplaXP_005162767.1 KCNQ2_u3 14..92 CDD:293248 1/2 (50%)
FCP1 <95..272 CDD:227517 40/159 (25%)
HIF-SF_euk 106..265 CDD:274055 39/132 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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