DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdspl3

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_021335375.1 Gene:ctdspl3 / 571337 ZFINID:ZDB-GENE-141215-56 Length:360 Species:Danio rerio


Alignment Length:158 Identity:48/158 - (30%)
Similarity:75/158 - (47%) Gaps:31/158 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LLVDLDQTVIHTTNDTVPDNIKGIYHFQL-YGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFG 273
            |::|||:|::.::.:.:||   ..|.|.. :..|....:..|||...|||:.|::.:|:.:.|..
Zfish   184 LVLDLDETLVFSSLNVIPD---AEYTFNTRFQDHKYKVYVILRPHVREFLQAMTKHFEMFVYTSA 245

  Fly   274 ARNYAHMIAQLLDPEGKFFSHRILSRDECF--------------NATSKT---DNLKALFP-NGD 320
            .:.||..|..:|||..|.|.|| |.:|:|.              ...|||   ||....|| :..
Zfish   246 KKEYAEKIVDILDPNKKLFRHR-LYQDDCACVLGHYIKDLTILERDLSKTVILDNAPHTFPYHLM 309

  Fly   321 SMVCI---IDDREDVWNMASNLIQVKPY 345
            :|:.|   |.|:||     ..|.::.||
Zfish   310 NMIPIKSWIGDQED-----RELQKLIPY 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 48/158 (30%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ctdspl3XP_021335375.1 Atrophin-1 <19..182 CDD:331285
NIF 183..343 CDD:308590 48/158 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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