DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdspl2a

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001071012.1 Gene:ctdspl2a / 558181 ZFINID:ZDB-GENE-061013-647 Length:469 Species:Danio rerio


Alignment Length:248 Identity:65/248 - (26%)
Similarity:111/248 - (44%) Gaps:52/248 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KEGELLTKGDAILELSECIHTTVIKDMCADCGADLRQNENGQTSEASVPMVHTMP--DLKVTQKL 190
            :|||::|:.| :..|:.....:...|:.....|:....|:.:..:....:.|..|  :.::|:|.
Zfish   216 EEGEIVTEAD-MPPLTAVGSNSNYPDVPPSPPAEGTYEEDWEVFDPYFFIKHVPPLTEEQLTRKP 279

  Fly   191 AQKLGHDDTRRLLADRKLVLLVDLDQTVIH-TTND------TVPDNIKGIYHFQLYGPHSPWYHT 248
            |..|   .||   :..:..|::|||:|::| :.|:      |.|...:.:. :|:|        .
Zfish   280 ALPL---KTR---STPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVI-YQVY--------V 329

  Fly   249 RLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECF---------- 303
            ||||...||||||||:||:.:.|...:.||..:..:|||:.:...|| |.|:.|.          
Zfish   330 RLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHR-LFREHCVCVQGNYIKDL 393

  Fly   304 ----NATSKT---DNLKALF----PNGDSMVCIIDDREDVWNMASNLIQVKPY 345
                ...|||   ||....|    .||..:.....|:.|     :.|:::.|:
Zfish   394 NILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKND-----NELLKLVPF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245 5/13 (38%)
FCP1_euk 202..348 CDD:131304 48/172 (28%)
PRK08581 373..>530 CDD:236304
BRCT_CTDP1 578..674 CDD:349361
ctdspl2aNP_001071012.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..136
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..250 2/18 (11%)
HIF-SF_euk 290..445 CDD:274055 48/167 (29%)
Blue background indicates that the domain is not in the aligned region.

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