DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdsp1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_021334687.1 Gene:ctdsp1 / 553744 ZFINID:ZDB-GENE-050522-523 Length:1222 Species:Danio rerio


Alignment Length:443 Identity:98/443 - (22%)
Similarity:154/443 - (34%) Gaps:152/443 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AAEGDDGGGGSGAK-------------------NSASGN-SNNNTSGGGIIVLRAALG------- 61
            :..||..|..:|.|                   |.|:.| :|.:.:.|.:..||:|..       
Zfish   808 SVSGDSTGLCAGEKTFQAADSSDSPDEESTLLENLANQNLTNRSENEGSVQDLRSADEIDVNGEF 872

  Fly    62 ----ENEAR--AVINKWRVREGQFVSAAQILFLYQPVGVDAKDAKDAGK--PGGD----CAIQRY 114
                |||..  ....:....|.:..|    ||.::.: |...|..|.|:  |..|    |.|:..
Zfish   873 CPDFENEGAHGPCCGEIETSEDEETS----LFGFEDL-VGCSDESDDGEVIPTNDPQLSCTIEEL 932

  Fly   115 KSQRAGV--VKKRLRKE----GELL-----------TKGDAILELSECIHTTV---IKDMCADCG 159
            .:.....  |...|..|    .|||           ||.:..||  |.||...   ..:..|.|.
Zfish   933 SNTETSTPCVSDSLDTEPKDTSELLNSPAVGGLAEQTKPNEKLE--ELIHQVARSEASEQEAICK 995

  Fly   160 ADLRQN-------ENGQTSE-----------------ASVPMVHTMPDLKVTQKLAQKLGHDDTR 200
            :|.::.       |:.::||                 ..||....:|.:|     ::.:|     
Zfish   996 SDQKKTGEQCDSYEDSESSEDEEFSEDCDCEICVPPTDQVPAKPLLPQIK-----SKDVG----- 1050

  Fly   201 RLLADRKLVLLVDLDQTVIHTT----NDT---VPDNIKGIYHFQLYGPHSPWYHTRLRPGTAEFL 258
                  |:.:::|||:|::|::    |:.   :|..|.|..| |:|        ...||...|||
Zfish  1051 ------KICVVIDLDETLVHSSFKPVNNADFIIPVEIDGTVH-QVY--------VLKRPHVDEFL 1100

  Fly   259 ERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDEC-----------------FNAT 306
            :||.:|:|..:.|.....||..::.|||..|.|.|.  |.|:.|                 .|..
Zfish  1101 KRMGELFECVLFTASLAKYADPVSDLLDKWGAFRSR--LFRESCVFHRGNYVKDLSRLGRDLNKV 1163

  Fly   307 SKTDNLKALF----PNGDSMVCIIDDREDVWNMASNLIQVKPYHFFQHTGDIN 355
            ...||..|.:    .|...:....||..|     :.|:.:.|  ||:....::
Zfish  1164 IIVDNSPASYIFHPDNAVPVASWFDDMSD-----TELLDLIP--FFERLSKVD 1209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 25/118 (21%)
FCP1_euk 202..348 CDD:131304 44/173 (25%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ctdsp1XP_021334687.1 HIF-SF_euk 1051..1209 CDD:274055 46/175 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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