DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdnep1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001017177.1 Gene:ctdnep1 / 549931 XenbaseID:XB-GENE-5939296 Length:244 Species:Xenopus tropicalis


Alignment Length:174 Identity:46/174 - (26%)
Similarity:72/174 - (41%) Gaps:21/174 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 RLLADRKLVLLVDLDQTVIHTTND----------TVPDNIKGIYHFQLYGPHSPWYHTRLRPGTA 255
            ||...::.||::|||:|:||:.:|          |.||.|..:    :...|...:....||...
 Frog    55 RLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKV----VIDKHPVRFFVHKRPHVD 115

  Fly   256 EFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGD 320
            .|||.:||.|||.:.|.....|...:|..||........|...:.......|...:|..:..:..
 Frog   116 FFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRRRFYRQHCTLELGSYIKDLSVVHSDLS 180

  Fly   321 SMVCIIDDREDVW-NMASNLIQVKPYHFFQHTGD---INAPPGL 360
            |:| |:|:....: :...|.|.:|.:  |....|   :|..|.|
 Frog   181 SVV-ILDNSPGAYRSHPDNAIPIKSW--FSDPSDTALLNLLPML 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 40/156 (26%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ctdnep1NP_001017177.1 HIF-SF_euk 61..229 CDD:274055 44/168 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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