DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdp1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_012820219.1 Gene:ctdp1 / 549776 XenbaseID:XB-GENE-479716 Length:977 Species:Xenopus tropicalis


Alignment Length:1011 Identity:322/1011 - (31%)
Similarity:461/1011 - (45%) Gaps:254/1011 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GENEARAVINKWRVREGQFVSAAQILFLYQPV-GVDAKDAKDAGKPGGD--CAIQRYKSQRAGVV 122
            |....|.|  :|:|..|..|....:|.|..|: |.:.::.:...:||..  ...::.||.|||||
 Frog    27 GPRPLRLV--EWKVSAGASVQIGSVLALAVPILGAEVREQRSHEEPGRPHRAPERKIKSDRAGVV 89

  Fly   123 KKRLRKEGELLTKGDAILELSECIHTTVIKDMCADCGADLR--QNENGQT----SEASVPMVHTM 181
            ::...|.||:...|..::.|..|.|..|:|.:||:||.||.  |::||:.    |.|:|.|||::
 Frog    90 QELCLKPGEVCPAGGVLVRLFSCNHPVVMKGLCAECGQDLTQLQSKNGKQQVPYSTATVSMVHSV 154

  Fly   182 PDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHTTNDTVPD-NIKGIYHFQLYGPHSPW 245
            |:|.|:.:.|::||.:|..||..:|||||:||||||:||||...... :.|||:|||| |...|.
 Frog   155 PELMVSSEKAEQLGREDQLRLHRNRKLVLMVDLDQTLIHTTEQHCQHMSRKGIFHFQL-GRGEPM 218

  Fly   246 YHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTD 310
            .||||||...||||::::|:|||:.|||:|.|||.||..||||.|.|||||||||||.:..|||.
 Frog   219 LHTRLRPHCKEFLEKIAKLFELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPYSKTG 283

  Fly   311 NLKALFPNGDSMVCIIDDREDVWNMASNLIQVKPYHFFQHTGDINAPPGLSKHEL---------- 365
            ||:.|||.|||||||||||||||..|.|||.||.|.:||.|||||||||..:.::          
 Frog   284 NLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGTGDINAPPGSREAQMKSKVSCSKPS 348

  Fly   366 ----------DGEGVDFKEITEKHGDKDKTE--------SSSEVKPEDTDKGD----NTVTSTSK 408
                      |.|......:.|:|.:..:..        ::||:..:||:..|    ...|::..
 Frog   349 EVTEQPEALQDSEHSKNTLVVEEHSNGHRKAVKELNGGCTNSELSKKDTECTDGLHEQDSTNSQL 413

  Fly   409 DDDVNEESVDVF-----EIEGDAKDPEVSNASSATEAPKEPRDKLNG------------------ 450
            .|.:|.::|...     .:|.|.: ..:||..|.|.|.|:....|:.                  
 Frog   414 TDALNSKNVKPLADKPPSLEQDER-TNISNPQSKTGAAKDLDFDLSSDSDSEGETRKISSPSASE 477

  Fly   451 ----------KTNAED-----IVVIDDSSSGSPDAEKAASDGEDVVVIDDNSKESTKAE------ 494
                      |||..|     .:..|..|..:.....:..:.:|.:.::|:..|...||      
 Frog   478 SENECKRSWRKTNKRDEECTTELCTDVGSKKARPENHSCFESKDTLPVEDDEMEVQSAEQDSLCD 542

  Fly   495 VPPTPAEKNEVVASSTTSP----------DEKRPSADADVATTSKTPSLRAPLEGQKQIEIEDPD 549
            :.....:|.|:...|..|.          |:.....|.|...|                   |.|
 Frog   543 LGNGCTDKKEIETESQNSEQSGITVGESLDQSMEEEDEDSEDT-------------------DED 588

  Fly   550 DYLLYLEVILRNIHKRFYSIYD-----ETTEIPDLKVIVPKIRSEVLRGKNLVFSGLVPTQMKLE 609
            |:|:|||.||..:|..:|:.||     |..::||::.|||:::|:||....:.||||.||...:|
 Frog   589 DHLIYLEEILVRVHTDYYAKYDRYLKKEVEDVPDIRKIVPELKSKVLENVIITFSGLHPTNFPIE 653

  Fly   610 QSRAYFIAKSLGAEV------KPNIDKEITHLVAVNAGTYKVNAAKKEPAIKVVNANWLWTCAER 668
            ::|.::.|::|||.:      ||:..:.:|||:|..|||.||..|:....:.:||..|||:|.||
 Frog   654 RTREFYHARALGANIRKNLILKPDDPERVTHLIAARAGTEKVRQAQNCKHLNIVNPEWLWSCLER 718

  Fly   669 WEHVEEKLFPL-------------------------------------------------DRKVR 684
            ||.|||:||||                                                 ..|:.
 Frog   719 WEKVEEQLFPLKDDYMKSQRAISPTTFPDIQSAFQTPLFHPTPIHPKTQPGPEVRLYDPVTGKLI 783

  Fly   685 NKGRQ------------PPAHC-----HSPEHVVN------YSERSEISPSSSKQQEEQSGNFR- 725
            .||.|            ||...     ||...||.      :.:..|:..::|  .|||||..| 
 Frog   784 RKGSQGSSQSPYIQAPSPPLSLPVHGEHSSFRVVQPHQEQLFDDDEELPTANS--DEEQSGPSRR 846

  Fly   726 -------ETLNPLLVFTNADIESMNKDYETFF--ESDSSSDEGPVNFENPPMDKKLLKRKRED-- 779
                   ||: ||......|:|||:|:.:...  .||.|..|          .||.:|.|:..  
 Frog   847 KRQPSMSETM-PLYTLCKEDLESMDKEVDDILGEGSDDSDSE----------KKKTIKVKKSQSA 900

  Fly   780 DNSNRAHDFFTRSDDIMIGAPNLVEVDISSNEEADDNNEKEDDDDEMPSAKFRRGEDLPSDLELG 844
            :..|:..:...|::.             ||:.|...:..:       |....|:.|:...|.|  
 Frog   901 EQGNKLKNPEERTES-------------SSSSERSLSGSR-------PRGHKRKLEEEEEDAE-- 943

  Fly   845 SESNSEKEPEDED--DGEWNMMGAALEREFLGLEDF 878
            |||:.|...|||:  ..|.:.|.||:|.|   |.||
 Frog   944 SESSKESSNEDEEGSSSEADEMAAAIEAE---LNDF 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 24/83 (29%)
FCP1_euk 202..348 CDD:131304 94/146 (64%)
COG5275 481..>658 CDD:227600 58/203 (29%)
BRCT 587..665 CDD:278934 32/83 (39%)
ctdp1XP_012820219.1 FCP1_euk 175..321 CDD:131304 94/146 (64%)
BRCT_CTDP1 622..724 CDD:349361 42/101 (42%)
FCP1_C 717..977 CDD:370422 72/298 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 174 1.000 Domainoid score I3632
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 395 1.000 Inparanoid score I1920
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405160at33208
OrthoFinder 1 1.000 - - FOG0005532
OrthoInspector 1 1.000 - - oto105084
Panther 1 1.100 - - LDO PTHR23081
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R439
SonicParanoid 1 1.000 - - X3392
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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