DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdnep1a

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001007310.1 Gene:ctdnep1a / 492343 ZFINID:ZDB-GENE-041114-177 Length:245 Species:Danio rerio


Alignment Length:174 Identity:46/174 - (26%)
Similarity:74/174 - (42%) Gaps:21/174 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 RLLADRKLVLLVDLDQTVIHTTND----------TVPDNIKGIYHFQLYGPHSPWYHTRLRPGTA 255
            ||.|.::.:|::|||:|:||:.:|          |.||.|..:    :...|...:....||...
Zfish    56 RLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKV----VIDKHPVRFFVHKRPHVD 116

  Fly   256 EFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGD 320
            .|||.:||.|||.:.|.....|...:|..||........|...:....:..|...:|..:..:..
Zfish   117 FFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLS 181

  Fly   321 SMVCIIDDREDVW-NMASNLIQVKPYHFFQHTGD---INAPPGL 360
            |:| |:|:....: :...|.|.:|.:  |....|   :|..|.|
Zfish   182 SIV-ILDNSPGAYRSHPDNAIPIKSW--FSDPSDTALLNLLPML 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 40/156 (26%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ctdnep1aNP_001007310.1 HIF-SF_euk 62..230 CDD:274055 43/168 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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