DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdnep1a

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001007310.1 Gene:ctdnep1a / 492343 ZFINID:ZDB-GENE-041114-177 Length:245 Species:Danio rerio


Alignment Length:174 Identity:46/174 - (26%)
Similarity:74/174 - (42%) Gaps:21/174 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 RLLADRKLVLLVDLDQTVIHTTND----------TVPDNIKGIYHFQLYGPHSPWYHTRLRPGTA 255
            ||.|.::.:|::|||:|:||:.:|          |.||.|..:    :...|...:....||...
Zfish    56 RLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKV----VIDKHPVRFFVHKRPHVD 116

  Fly   256 EFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGD 320
            .|||.:||.|||.:.|.....|...:|..||........|...:....:..|...:|..:..:..
Zfish   117 FFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLS 181

  Fly   321 SMVCIIDDREDVW-NMASNLIQVKPYHFFQHTGD---INAPPGL 360
            |:| |:|:....: :...|.|.:|.:  |....|   :|..|.|
Zfish   182 SIV-ILDNSPGAYRSHPDNAIPIKSW--FSDPSDTALLNLLPML 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245
FCP1_euk 202..348 CDD:131304 40/156 (26%)
PRK08581 373..>530 CDD:236304
BRCT_CTDP1 578..674 CDD:349361
ctdnep1aNP_001007310.1 HIF-SF_euk 62..230 CDD:274055 43/168 (26%)
Blue background indicates that the domain is not in the aligned region.

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