DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdp1

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001002873.1 Gene:ctdp1 / 442930 ZFINID:ZDB-GENE-040720-1 Length:947 Species:Danio rerio


Alignment Length:1043 Identity:335/1043 - (32%)
Similarity:473/1043 - (45%) Gaps:289/1043 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EGDDGGGGSGAKNSASGNSNNNTSGGGIIV----LRAALGENEARAVINKWRVREGQFVSAAQIL 86
            |..|.|||:.|:              |.:|    :|...|....|.:  :|:|:.|..|:...::
Zfish     3 EPADSGGGAAAE--------------GPVVQVTEIRCPAGARPLRLL--EWKVKPGALVNVDSVI 51

  Fly    87 FLYQPVGVDAKDAKDAGKPGGDCAIQRYKSQRAGVVKKRLRKEGELLTKGDAILELSECIHTTVI 151
            .:..|:..:::.....         ::.||.|||||::...:.|:::..|..|.::.||.|..|:
Zfish    52 AVCAPIPAESESRAPE---------KKLKSDRAGVVQELCCQLGQVIAPGTVIAKVEECCHPIVM 107

  Fly   152 KDMCADCGADL--RQNENGQ----TSEASVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVL 210
            |.:||:||.||  .|::||:    .|.|:|.|||::|:|.|:.:.|:::|.:|.:||..:|||||
Zfish   108 KGLCAECGQDLTQMQSKNGKQQAPISTATVSMVHSVPELMVSSEQAEQIGREDQQRLHRNRKLVL 172

  Fly   211 LVDLDQTVIHTTNDTVPD-NIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGA 274
            :||||||:||||...... :.|||:|||| |...|..||||||...:|||::::|:|||:.|||:
Zfish   173 MVDLDQTLIHTTEQHCQRMSNKGIFHFQL-GRGEPMLHTRLRPHCKDFLEKIAKLFELHVFTFGS 236

  Fly   275 RNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGDSMVCIIDDREDVWNMASNL 339
            |.|||.||..||||.|.|||||||||||.:..|||.|||.|||.|||||||||||||||..|.||
Zfish   237 RLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLKNLFPCGDSMVCIIDDREDVWKFAPNL 301

  Fly   340 IQVKPYHFFQHTGDINAPPGLSKHELDGEGVDFKEITEKHGDK--DKTESSSEVKPEDTDKGDNT 402
            |.||.|.:||.|||||||||..:.::..:|        ..|.:  :.|||..|       :..|.
Zfish   302 ITVKKYIYFQGTGDINAPPGSREAQMAKKG--------NQGGRTVEGTESGQE-------EQRNG 351

  Fly   403 VTSTSKDDDVNEESVDVFEIEGDAKDPEVSNASSAT-------------EAPKEPR---DKLNGK 451
            :..:|||.....|              |.|.:|:||             |.|.|..   ||...|
Zfish   352 LRKSSKDHKTGHE--------------ESSTSSTATQGASANERTHPTGEQPNESADSGDKCTVK 402

  Fly   452 TNAE---DIVVIDDSS---SGSPDAEKA---------ASDGEDVVVIDDNSKESTKAEVPPTPAE 501
            |.||   .:..|...|   :.:|||..|         .|:.|..:|:.|:..|...|:.......
Zfish   403 TEAEGSSGVSCISGESEIPNAAPDAAAANDLDFDLSSDSESEGKMVLSDSDGEGKTADTGKPKQR 467

  Fly   502 KNEVVASSTTSPDEKRPSADADVAT------------------------------TSKTPSLRAP 536
            |||...|.....|::|.....|..|                              |....||...
Zfish   468 KNEECKSKEDDGDKQRTEGGDDPVTDPEGLRDLGNGCSDKKEMETESQNSEQSGVTMGEESLDHS 532

  Fly   537 LEGQKQIEIE--DPDDYLLYLEVILRNIHKRFYSIYD-----ETTEIPDLKVIVPKIRSEVLRGK 594
            :|.:...|.|  |.||:|:|||.||..||..:||.|:     |::|.||::.|||:::...|.|.
Zfish   533 MEDEDDEEEEDVDQDDHLIYLEEILVRIHNEYYSRYEAFLKKESSESPDIRKIVPELKGRTLAGT 597

  Fly   595 NLVFSGLVPTQMKLEQSRAYFIAKSLGAEV---------KPNIDKEITHLVAVNAGTYKVNAAKK 650
            .::||||.||...:|::|.::..|:|||::         .||   ..|||:|..|||.||..|:.
Zfish   598 TVIFSGLYPTNYPMERTREWYHGKALGAKLCKTLVLNAKDPN---RTTHLIAARAGTEKVRQAQG 659

  Fly   651 EPAIKVVNANWLWTCAERWEHVEEKLFPLDR---------------------------------- 681
            ...:.|||.:|||.|.||||.|||:||||..                                  
Zfish   660 CKHLHVVNPDWLWACLERWERVEEQLFPLKEDYNKSHRSNSPGAFLDIHGSAPRPPFQAPQVQPK 724

  Fly   682 ---------------KVRNKGRQ---PPAHCHS-PEHVVNYSERSEIS-------------PSSS 714
                           |:..:|.|   ||::.|| |..  :.|.:.::|             |:.|
Zfish   725 PLPAPEMRTYDPVTGKLIRRGPQASRPPSYLHSHPSS--SMSAKGDLSNLRSAQGSQQTDEPAGS 787

  Fly   715 KQQEEQSGNFR--------ETLNPLLVFTNADIESMNKDYETFF--ESDSSSDEGPVNFENPPMD 769
            ...:||.|..|        ||: ||......|::||:|:.:...  |||:.| ||          
Zfish   788 SPDDEQPGPSRRKRQPSMSETM-PLYTLCKEDLDSMDKEVDDILGEESDNES-EG---------- 840

  Fly   770 KKLLKRKREDDNSNRAHDFFTR---SDDIMIGAPNLV------------EVDISSN--------- 810
            |....|..|::...|.|....:   :|.|    |.|.            ||.::.|         
Zfish   841 KGKAGRIEEEEEEVRPHTSKQKPPATDHI----PPLAAVVEETSQTSTSEVCVTENVLRGHKRKL 901

  Fly   811 EEADDNNEKEDDDDEMPSAKFRRGEDLPSDLELGSESNSEKEPEDEDDGEWNMMGAALEREFLGL 875
            |||.::.:|:::|                    |..|....|.|:....|.:.|.||||.|   |
Zfish   902 EEAREDEDKDEED--------------------GDSSKDSNEDEEGSSSEADEMAAALEAE---L 943

  Fly   876 EDF 878
            .||
Zfish   944 NDF 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245 17/82 (21%)
FCP1_euk 202..348 CDD:131304 94/146 (64%)
PRK08581 373..>530 CDD:236304 45/219 (21%)
BRCT_CTDP1 578..674 CDD:349361 42/104 (40%)
ctdp1NP_001002873.1 Biotinyl_lipoyl_domains <34..98 CDD:448245 15/74 (20%)
FCP1_euk 164..310 CDD:131304 94/146 (64%)
BRCT_CTDP1 581..683 CDD:349361 42/104 (40%)
FCP1_C 676..947 CDD:462751 72/312 (23%)

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