DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdp1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001002873.1 Gene:ctdp1 / 442930 ZFINID:ZDB-GENE-040720-1 Length:947 Species:Danio rerio


Alignment Length:1043 Identity:335/1043 - (32%)
Similarity:473/1043 - (45%) Gaps:289/1043 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EGDDGGGGSGAKNSASGNSNNNTSGGGIIV----LRAALGENEARAVINKWRVREGQFVSAAQIL 86
            |..|.|||:.|:              |.:|    :|...|....|.:  :|:|:.|..|:...::
Zfish     3 EPADSGGGAAAE--------------GPVVQVTEIRCPAGARPLRLL--EWKVKPGALVNVDSVI 51

  Fly    87 FLYQPVGVDAKDAKDAGKPGGDCAIQRYKSQRAGVVKKRLRKEGELLTKGDAILELSECIHTTVI 151
            .:..|:..:::.....         ::.||.|||||::...:.|:::..|..|.::.||.|..|:
Zfish    52 AVCAPIPAESESRAPE---------KKLKSDRAGVVQELCCQLGQVIAPGTVIAKVEECCHPIVM 107

  Fly   152 KDMCADCGADL--RQNENGQ----TSEASVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVL 210
            |.:||:||.||  .|::||:    .|.|:|.|||::|:|.|:.:.|:::|.:|.:||..:|||||
Zfish   108 KGLCAECGQDLTQMQSKNGKQQAPISTATVSMVHSVPELMVSSEQAEQIGREDQQRLHRNRKLVL 172

  Fly   211 LVDLDQTVIHTTNDTVPD-NIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGA 274
            :||||||:||||...... :.|||:|||| |...|..||||||...:|||::::|:|||:.|||:
Zfish   173 MVDLDQTLIHTTEQHCQRMSNKGIFHFQL-GRGEPMLHTRLRPHCKDFLEKIAKLFELHVFTFGS 236

  Fly   275 RNYAHMIAQLLDPEGKFFSHRILSRDECFNATSKTDNLKALFPNGDSMVCIIDDREDVWNMASNL 339
            |.|||.||..||||.|.|||||||||||.:..|||.|||.|||.|||||||||||||||..|.||
Zfish   237 RLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLKNLFPCGDSMVCIIDDREDVWKFAPNL 301

  Fly   340 IQVKPYHFFQHTGDINAPPGLSKHELDGEGVDFKEITEKHGDK--DKTESSSEVKPEDTDKGDNT 402
            |.||.|.:||.|||||||||..:.::..:|        ..|.:  :.|||..|       :..|.
Zfish   302 ITVKKYIYFQGTGDINAPPGSREAQMAKKG--------NQGGRTVEGTESGQE-------EQRNG 351

  Fly   403 VTSTSKDDDVNEESVDVFEIEGDAKDPEVSNASSAT-------------EAPKEPR---DKLNGK 451
            :..:|||.....|              |.|.:|:||             |.|.|..   ||...|
Zfish   352 LRKSSKDHKTGHE--------------ESSTSSTATQGASANERTHPTGEQPNESADSGDKCTVK 402

  Fly   452 TNAE---DIVVIDDSS---SGSPDAEKA---------ASDGEDVVVIDDNSKESTKAEVPPTPAE 501
            |.||   .:..|...|   :.:|||..|         .|:.|..:|:.|:..|...|:.......
Zfish   403 TEAEGSSGVSCISGESEIPNAAPDAAAANDLDFDLSSDSESEGKMVLSDSDGEGKTADTGKPKQR 467

  Fly   502 KNEVVASSTTSPDEKRPSADADVAT------------------------------TSKTPSLRAP 536
            |||...|.....|::|.....|..|                              |....||...
Zfish   468 KNEECKSKEDDGDKQRTEGGDDPVTDPEGLRDLGNGCSDKKEMETESQNSEQSGVTMGEESLDHS 532

  Fly   537 LEGQKQIEIE--DPDDYLLYLEVILRNIHKRFYSIYD-----ETTEIPDLKVIVPKIRSEVLRGK 594
            :|.:...|.|  |.||:|:|||.||..||..:||.|:     |::|.||::.|||:::...|.|.
Zfish   533 MEDEDDEEEEDVDQDDHLIYLEEILVRIHNEYYSRYEAFLKKESSESPDIRKIVPELKGRTLAGT 597

  Fly   595 NLVFSGLVPTQMKLEQSRAYFIAKSLGAEV---------KPNIDKEITHLVAVNAGTYKVNAAKK 650
            .::||||.||...:|::|.::..|:|||::         .||   ..|||:|..|||.||..|:.
Zfish   598 TVIFSGLYPTNYPMERTREWYHGKALGAKLCKTLVLNAKDPN---RTTHLIAARAGTEKVRQAQG 659

  Fly   651 EPAIKVVNANWLWTCAERWEHVEEKLFPLDR---------------------------------- 681
            ...:.|||.:|||.|.||||.|||:||||..                                  
Zfish   660 CKHLHVVNPDWLWACLERWERVEEQLFPLKEDYNKSHRSNSPGAFLDIHGSAPRPPFQAPQVQPK 724

  Fly   682 ---------------KVRNKGRQ---PPAHCHS-PEHVVNYSERSEIS-------------PSSS 714
                           |:..:|.|   ||::.|| |..  :.|.:.::|             |:.|
Zfish   725 PLPAPEMRTYDPVTGKLIRRGPQASRPPSYLHSHPSS--SMSAKGDLSNLRSAQGSQQTDEPAGS 787

  Fly   715 KQQEEQSGNFR--------ETLNPLLVFTNADIESMNKDYETFF--ESDSSSDEGPVNFENPPMD 769
            ...:||.|..|        ||: ||......|::||:|:.:...  |||:.| ||          
Zfish   788 SPDDEQPGPSRRKRQPSMSETM-PLYTLCKEDLDSMDKEVDDILGEESDNES-EG---------- 840

  Fly   770 KKLLKRKREDDNSNRAHDFFTR---SDDIMIGAPNLV------------EVDISSN--------- 810
            |....|..|::...|.|....:   :|.|    |.|.            ||.::.|         
Zfish   841 KGKAGRIEEEEEEVRPHTSKQKPPATDHI----PPLAAVVEETSQTSTSEVCVTENVLRGHKRKL 901

  Fly   811 EEADDNNEKEDDDDEMPSAKFRRGEDLPSDLELGSESNSEKEPEDEDDGEWNMMGAALEREFLGL 875
            |||.::.:|:::|                    |..|....|.|:....|.:.|.||||.|   |
Zfish   902 EEAREDEDKDEED--------------------GDSSKDSNEDEEGSSSEADEMAAALEAE---L 943

  Fly   876 EDF 878
            .||
Zfish   944 NDF 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 17/82 (21%)
FCP1_euk 202..348 CDD:131304 94/146 (64%)
COG5275 481..>658 CDD:227600 66/222 (30%)
BRCT 587..665 CDD:278934 32/86 (37%)
ctdp1NP_001002873.1 Biotinyl_lipoyl_domains <36..98 CDD:299706 15/70 (21%)
FCP1_euk 164..310 CDD:131304 94/146 (64%)
BRCT 604..670 CDD:294035 24/68 (35%)
FCP1_C 676..947 CDD:286402 72/312 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594640
Domainoid 1 1.000 173 1.000 Domainoid score I3650
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 399 1.000 Inparanoid score I1889
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405160at33208
OrthoFinder 1 1.000 - - FOG0005532
OrthoInspector 1 1.000 - - oto41165
orthoMCL 1 0.900 - - OOG6_102037
Panther 1 1.100 - - LDO PTHR23081
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R439
SonicParanoid 1 1.000 - - X3392
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.930

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