DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ttm3

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster


Alignment Length:92 Identity:28/92 - (30%)
Similarity:41/92 - (44%) Gaps:9/92 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 HSPW-YHT----RLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDE 301
            |..| |.|    :.|||...||::.|:.:|:.|.|......|..:...|||.| :..:|::....
  Fly   152 HPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDALDPYG-YIKYRLVRGAT 215

  Fly   302 CFNATSKTDNLKALFPNGD-SMVCIID 327
            .......|.||..|  |.| |.|.::|
  Fly   216 DLVEGQHTKNLDYL--NRDLSRVIVVD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 28/92 (30%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
ttm3NP_610130.1 CPDc 138..265 CDD:214729 28/92 (30%)
HIP1_clath_bdg 276..332 CDD:293123
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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