DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and Ctdspl2

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_997615.1 Gene:Ctdspl2 / 329506 MGIID:1196405 Length:465 Species:Mus musculus


Alignment Length:164 Identity:48/164 - (29%)
Similarity:75/164 - (45%) Gaps:43/164 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LLVDLDQTVIH-TTND------TVPDNIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYEL 267
            |::|||:|::| :.|:      |.|...:.:. :|:|        .||||...||||||||:||:
Mouse   289 LVLDLDETLVHCSLNELEDAALTFPVLFQDVI-YQVY--------VRLRPFFREFLERMSQMYEI 344

  Fly   268 HICTFGARNYAHMIAQLLDPEGKFFSHRILSRDECF--------------NATSKT---DNLKAL 315
            .:.|...:.||..:..:|||:.:...|| |.|:.|.              ...|||   ||....
Mouse   345 ILFTASKKVYADKLLNILDPKKQLVRHR-LFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQA 408

  Fly   316 F----PNGDSMVCIIDDREDVWNMASNLIQVKPY 345
            |    .||..:.....|:.|     :.|:::.|:
Mouse   409 FAYQLSNGIPIESWFMDKND-----NELLKLIPF 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 48/164 (29%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
Ctdspl2NP_997615.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..239
HIF-SF_euk 286..447 CDD:274055 48/164 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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