DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdspl2b

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_073762281.1 Gene:ctdspl2b / 323089 ZFINID:ZDB-GENE-030131-1809 Length:490 Species:Danio rerio


Alignment Length:197 Identity:58/197 - (29%)
Similarity:88/197 - (44%) Gaps:51/197 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 HTMP--DLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIH-TTND------TVPDNIKGIY 234
            |..|  :.::|:|.|..|   .||   :..:..|::|||:|::| :.|:      |.|...:.:.
Zfish   287 HVPPLTEEQLTRKPALPL---KTR---STPEFSLVLDLDETLVHCSLNELDDAALTFPVLFQDVI 345

  Fly   235 HFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSR 299
             :|:|        .||||...||||||||:||:.:.|...:.||..:..:|||..:...|| |.|
Zfish   346 -YQVY--------VRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHR-LFR 400

  Fly   300 DECF--------------NATSKT---DNLKALF----PNGDSMVCIIDDREDVWNMASNLIQVK 343
            :.|.              ...|||   ||....|    .||..:.....||.|     |.|:::.
Zfish   401 EHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRND-----SELLKLV 460

  Fly   344 PY 345
            |:
Zfish   461 PF 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245
FCP1_euk 202..348 CDD:131304 50/172 (29%)
PRK08581 373..>530 CDD:236304
BRCT_CTDP1 578..674 CDD:349361
ctdspl2bXP_073762281.1 None
Blue background indicates that the domain is not in the aligned region.

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