DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and ctdsp2

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:198 Identity:52/198 - (26%)
Similarity:79/198 - (39%) Gaps:57/198 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LRQNENGQTSEASVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHTT---- 222
            |...:||  :.|.:|....:|  .||       .||       ..|:.:::|||:|::|::    
Zfish    61 LEPEDNG--TFAKIPGESLLP--AVT-------SHD-------QGKICVVIDLDETLVHSSFKPI 107

  Fly   223 ---NDTVPDNIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQL 284
               :..||..|:|..| |:|        ...||...|||:||.:|:|..:.|.....||..:..|
Zfish   108 SNADFIVPVEIEGTTH-QVY--------VLKRPYVDEFLQRMGELFECVLFTASLAKYADPVTDL 163

  Fly   285 LDPEGKFFSHRILSRDEC-----------------FNATSKTDNLKALF----PNGDSMVCIIDD 328
            ||..|.|.:.  |.|:.|                 .:.|...||..|.:    .|...::...||
Zfish   164 LDQCGVFRTR--LFRESCVFYQGCYVKDLSRLGRELHKTLILDNSPASYIFHPENAVPVLSWFDD 226

  Fly   329 RED 331
            .||
Zfish   227 SED 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245
FCP1_euk 202..348 CDD:131304 42/158 (27%)
PRK08581 373..>530 CDD:236304
BRCT_CTDP1 578..674 CDD:349361
ctdsp2NP_955838.1 HIF-SF_euk 88..247 CDD:274055 42/153 (27%)
Blue background indicates that the domain is not in the aligned region.

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