DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and Ctdspl

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001382669.1 Gene:Ctdspl / 301056 RGDID:1304841 Length:276 Species:Rattus norvegicus


Alignment Length:182 Identity:52/182 - (28%)
Similarity:78/182 - (42%) Gaps:49/182 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 ENGQTSEA---------SVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHT 221
            |||...:.         |.|..:.:|::.|       |.|.         |..:::|||:|::|:
  Rat    72 ENGGLQKGDQRQVIPVPSPPAKYLLPEVTV-------LDHG---------KKCVVIDLDETLVHS 120

  Fly   222 T-------NDTVPDNIKGIYHFQLYGPHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAH 279
            :       :..||..|.|..| |:|        ...||...|||:||.||:|..:.|.....||.
  Rat   121 SFKPISNADFIVPVEIDGTIH-QVY--------VLKRPHVDEFLQRMGQLFECVLFTASLAKYAD 176

  Fly   280 MIAQLLDPEGKFFSHRILSRDEC-FNATSKTDNLKALFPNGD--SMVCIIDD 328
            .:|.|||..|.|.:.  |.|:.| |:..:...:|..|   |.  |.|.|:|:
  Rat   177 PVADLLDRWGVFRAR--LFRESCVFHRGNYVKDLSRL---GRELSKVIIVDN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706
FCP1_euk 202..348 CDD:131304 43/137 (31%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
CtdsplNP_001382669.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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