DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and Ctdsp1

DIOPT Version :9

Sequence 1:NP_001286846.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_036020359.1 Gene:Ctdsp1 / 227292 MGIID:2654470 Length:302 Species:Mus musculus


Alignment Length:269 Identity:66/269 - (24%)
Similarity:107/269 - (39%) Gaps:82/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 AGVVKKRLRKE---GELLTKGDAILELSE------CIHT---TVIKD----MCADCGADLRQNEN 167
            :..|..::.||   |.|..|||....:|:      .:|:   .|.:|    :.|..||.|...||
Mouse     3 SSAVITQISKEEARGPLRGKGDQKSAVSQKPRSRGILHSLFCCVCRDDGEPLPAHSGAPLLVEEN 67

  Fly   168 GQTSEASVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHTT----NDT--- 225
            |...: ..|:.:.:|:.|...                ..|:.:::|||:|::|::    |:.   
Mouse    68 GAIPK-HTPVQYLLPEAKAQD----------------SDKICVVIDLDETLVHSSFKPVNNADFI 115

  Fly   226 VPDNIKGIYHFQLYG-------------------------------PH--SPWYHTRLRPGTAEF 257
            :|..|.|:.| |.:|                               ||  .|..:...||...||
Mouse   116 IPVEIDGVVH-QEWGMVGAASLDCPSSSTVPVPLLWITPKPVGQQLPHWLVPQVYVLKRPHVDEF 179

  Fly   258 LERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDEC-FNATSKTDNLKALFPNGDS 321
            |:||.:|:|..:.|.....||..:|.|||..|.|.:.  |.|:.| |:..:...:|..|   |..
Mouse   180 LQRMGELFECVLFTASLAKYADPVADLLDKWGAFRAR--LFRESCVFHRGNYVKDLSRL---GRD 239

  Fly   322 M--VCIIDD 328
            :  |.|:|:
Mouse   240 LRRVLILDN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_001286846.1 Biotinyl_lipoyl_domains 59..142 CDD:299706 8/25 (32%)
FCP1_euk 202..348 CDD:131304 44/170 (26%)
COG5275 481..>658 CDD:227600
BRCT 587..665 CDD:278934
Ctdsp1XP_036020359.1 HIF-SF_euk 90..290 CDD:274055 44/165 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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