DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fcp1 and Ctdsp1

DIOPT Version :10

Sequence 1:NP_611934.1 Gene:Fcp1 / 37925 FlyBaseID:FBgn0035026 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001408190.1 Gene:Ctdsp1 / 227292 MGIID:2654470 Length:302 Species:Mus musculus


Alignment Length:269 Identity:66/269 - (24%)
Similarity:107/269 - (39%) Gaps:82/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 AGVVKKRLRKE---GELLTKGDAILELSE------CIHT---TVIKD----MCADCGADLRQNEN 167
            :..|..::.||   |.|..|||....:|:      .:|:   .|.:|    :.|..||.|...||
Mouse     3 SSAVITQISKEEARGPLRGKGDQKSAVSQKPRSRGILHSLFCCVCRDDGEPLPAHSGAPLLVEEN 67

  Fly   168 GQTSEASVPMVHTMPDLKVTQKLAQKLGHDDTRRLLADRKLVLLVDLDQTVIHTT----NDT--- 225
            |...: ..|:.:.:|:.|...                ..|:.:::|||:|::|::    |:.   
Mouse    68 GAIPK-HTPVQYLLPEAKAQD----------------SDKICVVIDLDETLVHSSFKPVNNADFI 115

  Fly   226 VPDNIKGIYHFQLYG-------------------------------PH--SPWYHTRLRPGTAEF 257
            :|..|.|:.| |.:|                               ||  .|..:...||...||
Mouse   116 IPVEIDGVVH-QEWGMVGAASLDCPSSSTVPVPLLWITPKPVGQQLPHWLVPQVYVLKRPHVDEF 179

  Fly   258 LERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFSHRILSRDEC-FNATSKTDNLKALFPNGDS 321
            |:||.:|:|..:.|.....||..:|.|||..|.|.:.  |.|:.| |:..:...:|..|   |..
Mouse   180 LQRMGELFECVLFTASLAKYADPVADLLDKWGAFRAR--LFRESCVFHRGNYVKDLSRL---GRD 239

  Fly   322 M--VCIIDD 328
            :  |.|:|:
Mouse   240 LRRVLILDN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fcp1NP_611934.1 Biotinyl_lipoyl_domains 59..142 CDD:448245 8/25 (32%)
FCP1_euk 202..348 CDD:131304 44/170 (26%)
PRK08581 373..>530 CDD:236304
BRCT_CTDP1 578..674 CDD:349361
Ctdsp1NP_001408190.1 HIF-SF_euk 90..290 CDD:274055 44/165 (27%)
Blue background indicates that the domain is not in the aligned region.

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