DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11414 and lst-5

DIOPT Version :9

Sequence 1:NP_611932.2 Gene:CG11414 / 37923 FlyBaseID:FBgn0035024 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_872063.2 Gene:lst-5 / 353399 WormBaseID:WBGene00016890 Length:346 Species:Caenorhabditis elegans


Alignment Length:260 Identity:55/260 - (21%)
Similarity:94/260 - (36%) Gaps:76/260 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 DKLPYRE--------------LEANNRSDLYSKKYR--IGFCTAE--------------IRQQF- 132
            |.|.::|              ||....|:::.....  :|.|..|              .||:| 
 Worm    38 DDLQFQEEFVVKEEEEEEELSLERGESSNVHPSDAHGYLGMCDFEDSDDTMMPVPKREMTRQKFR 102

  Fly   133 -FKLLDHPCPKCDAPPYRTF---EGLRNHVRSEH---KLLY-------CDLCVETLNIFTFERRC 183
             |:..::.|.:||    |.|   ..|:||....|   |.|:       ||:|.:..:..:    .
 Worm   103 RFRHKEYQCDECD----RMFTLKHNLQNHFVQYHMGCKTLHKACVSSKCDICGKIYSAVS----V 159

  Fly   184 YTQAELQLHNTKGDPDNRSHRGHPLCEYCNKRYVDRDELFRHL---RREHYFCHFCDADGCNEFY 245
            ..:..|..||...|...        |..|::.::.:..|.:|:   :||...|.:.:..|....:
 Worm   160 LAEHMLNEHNRYLDQIE--------CPDCHEFFLTQTALQKHMKEHKREEKHCPYKECRGIKFRF 216

  Fly   246 NDYADLAEHFRAEHFLCEEGKCATEQFVGAFRNEIEY-KAH-----VANVHGKS----LNKQQAK 300
            |  .:|.||.|.:|...|...|...........:|:: |.|     ::|:...|    :|:|..|
 Worm   217 N--RELNEHVRLQHKSKELSCCVCNMVFRQLSAKIKHEKTHEKGSPISNILKSSKCSAVNRQVEK 279

  Fly   301  300
             Worm   280  279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11414NP_611932.2 COG5236 2..>294 CDD:227561 52/252 (21%)
zf-C3HC4_3 44..94 CDD:290631
DUF4187 <220..259 CDD:290533 11/41 (27%)
lst-5NP_872063.2 C2H2 Zn finger 111..132 CDD:275368 8/24 (33%)
C2H2 Zn finger 147..168 CDD:275368 4/24 (17%)
C2H2 Zn finger 177..197 CDD:275368 4/19 (21%)
C2H2 Zn finger 208..227 CDD:275368 6/20 (30%)
C2H2 Zn finger 235..255 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5236
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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