DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4622 and Zcchc8

DIOPT Version :10

Sequence 1:NP_611929.1 Gene:CG4622 / 37919 FlyBaseID:FBgn0035021 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001387897.1 Gene:Zcchc8 / 288661 RGDID:1309774 Length:695 Species:Rattus norvegicus


Alignment Length:688 Identity:181/688 - (26%)
Similarity:290/688 - (42%) Gaps:193/688 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DDSQNSVVIVDDDVEDG----ELEDDVVFVCPEELTRKEIEPPTDKIEEK-----------HSNT 58
            ||.:..    |||.|:|    ||::. :..|.|  |.:::.....:::.|           .|||
  Rat    33 DDEEED----DDDDENGVGDAELQEQ-LRRCEE--TIEQLRAENQELKRKLNILTRPSGILVSNT 90

  Fly    59 SIQDTTEEDGDSLVFEVRFNKEAHFTSLQQQV---LVALEGAFADKQIVFRDNPQELMISAFERS 120
            .|        |..:.::.|...|......|::   :..|...|.::|   :::.::...|...:.
  Rat    91 KI--------DGPLLQILFMNNAISKQYHQEIEEFVSNLVKRFEEQQ---KNDVEKTSFSLLPQP 144

  Fly   121 RTLPEEEPQDL------------------------FLIDT--QPAAKLNAA-----NVPSYKRCN 154
            .::..||.:.:                        |.:|.  ||....|..     .:|.|::..
  Rat   145 SSVMLEEDRKVEESCAIKNNKEAFSVVGSVLYFTNFCLDKLGQPLLNENPQLTEGWEIPKYQQVF 209

  Fly   155 ADILDEQTEERKKLKAEAVNKCFRPKAQSSCFNCGDTEHSLRDCTKPRNNSRITRARKK------ 213
            :.|:..:.:| .::||:      |||..  |||||..||.:::|..|||.:||:..||:      
  Rat   210 SHIVSLEGQE-MQVKAK------RPKPH--CFNCGSEEHQMKECPMPRNAARISEKRKEYMDACG 265

  Fly   214 ---MTSRTERYHV-DTEQRFGHIRPGKISTKTRHAMGYSRGQLPFIFYRMRVLGYPPAWLEEAKV 274
               ..|..:|||. :.|:|||..:||.||.:.:.|:|.:...||...||||.|||||.||:||::
  Rat   266 EANSQSFQQRYHAEEVEERFGRFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAEL 330

  Fly   275 QSSGIALFNADGSEVTKSDEEEGESET-------FKYDVNKIVEYPGFNVQPKANCFDDFKHHNV 332
            ::||:||:  ||     :|:.:||:||       ..||::|:|.|||||:.......|:::....
  Rat   331 ETSGLALY--DG-----NDDADGETETGEIQNKNVTYDLSKLVNYPGFNISTPRGIPDEWRMFGS 388

  Fly   333 PPFQESQSKENFIKSLGENVINGYKR---KKLVDLPAPHDRVPAPSELLTSFDDYDMELEEETE- 393
            .|.|..|.|:.|...|..|:.:...:   |:.....:|:.......|...:....||||:.:.| 
  Rat   389 IPMQACQQKDVFASYLNSNIQSPSVKSSSKRSSSQSSPNSPKKQRREGSAAASPADMELDSDIEI 453

  Fly   394 ------------DPPLPPSVPPPQP---PPP---EECEDG--ELT-ARSPSP------------S 425
                        .|||||..|||.|   |||   .....|  .|| :.||.|            :
  Rat   454 PPGSQSSKAFQFQPPLPPGTPPPLPQGTPPPLFTPPLPKGTPPLTPSDSPQPRPTASGVDEDALT 518

  Fly   426 LEDLKAQQEEL---LQE-----------LDVNASHNTTANESKSPTDLD---------------- 460
            ||:|:.||.::   ||:           :|...:.|:.|: |..|.:.|                
  Rat   519 LEELEEQQRQIWAALQQAEGANSDSDVPMDTPLTGNSVAS-SPCPNEFDLRVPEGRALEKPVLAE 582

  Fly   461 -DTSETEVGPS---AAES---GNNEQSRSAPSTPFKASYEGTPLLKFS---------------VY 503
             ||:..|  ||   |||:   ...|:..||...|.....:...:|..|               .:
  Rat   583 PDTASPE--PSCSPAAEAAVLSQKEEGVSAEGDPGDGLLDNGGVLNISNGGNHLDTRPPTASKTH 645

  Fly   504 DRLPVGSNFKVGVSDVINFENLPDSTGKYEQMKDLLKN 541
            ..:|..|.|..|::. ..|||:.:|||.|.::::||||
  Rat   646 SPVPDMSKFAHGITP-FEFENMAESTGMYLRIRNLLKN 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4622NP_611929.1 PSP 229..281 CDD:128850 25/51 (49%)
Zcchc8NP_001387897.1 zf-CCHC 229..246 CDD:395050 8/18 (44%)
PSP 285..337 CDD:470641 25/51 (49%)

Return to query results.
Submit another query.