DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13585 and smim14

DIOPT Version :10

Sequence 1:NP_611928.1 Gene:CG13585 / 37918 FlyBaseID:FBgn0035020 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_001016053.2 Gene:smim14 / 548807 XenbaseID:XB-GENE-5732314 Length:103 Species:Xenopus tropicalis


Alignment Length:107 Identity:43/107 - (40%)
Similarity:65/107 - (60%) Gaps:15/107 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFDGCECVWSQEYAMQRLINFIRQNQNACGDNECY-DVTGRTPHQAQIAGRGDDSGFSVAMI--- 64
            :||.|||:.|.|:||:||||.:||:|:.|.||||: ::.|  |:.:      .|.||::|||   
 Frog     5 NFDPCECICSHEHAMRRLINLLRQSQSYCTDNECFQELPG--PNSS------TDGGFNIAMIAMA 61

  Fly    65 FLIVAMFMYIVNP-STWGNFTSNKRAGGRRDNNQDGSPPQPP 105
            :|::.:.:|::.| |..||..|.|  .....:||...||.||
 Frog    62 WLVIGVTLYLLRPRSLRGNGPSAK--PNSPHSNQGPEPPAPP 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13585NP_611928.1 DUF2615 2..100 CDD:402563 39/100 (39%)
smim14NP_001016053.2 DUF2615 3..101 CDD:402563 41/105 (39%)

Return to query results.
Submit another query.