DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60e and Ir75b

DIOPT Version :9

Sequence 1:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:674 Identity:128/674 - (18%)
Similarity:231/674 - (34%) Gaps:195/674 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VIKMISFLLVSVLLC----LVGASDSESMQVQVLQDLNLALQ----------TELNVFIDFECCA 52
            :|.|.....|.:|.|    |...:.|:::..| .|.|:..:|          .:|.||:|..|..
  Fly    12 LIHMAKLSHVLILHCSLSHLALLAQSKNIFTQ-FQPLHSDIQLNDDFLNHNILKLGVFLDINCDK 75

  Fly    53 TSEILHKLDSPRI-------LLSSNSREARDLRIRGNFTESTLIIVSVMDSDL-----NPLVASL 105
            :..:|....:.|.       |:...|.....|  ..:|.|:.:.:    |:|:     :|...:.
  Fly    76 SGTVLDMASAKRFFSHRYHWLIYDRSMNFSVL--ESHFKEAQIFV----DADVTYVTHDPFSKNF 134

  Fly   106 LPRLLDELH-------ELHI-----VFLSNEEPGFPK--QDLYTYC---FKEGFVNVILMSGKGL 153
            |  |.|..:       ||:|     :|.:.......:  .:|||..   .::.|.. :.|....:
  Fly   135 L--LYDVYNKGRQLGGELNITADREIFCNKTNCRVERYLSELYTRSALQHRKSFTG-LTMRATAV 196

  Fly   154 YSYLPYPSIQPISLSNVSEYFDRARIIRNFQGFPVRILRSTLAPRDFEYSNEQGGLVRAGYL--- 215
            .:.|      |:::| :.|.||       |.....||...|.|              |.||.   
  Fly   197 VTAL------PLNVS-IKEIFD-------FMNSKYRIQLDTYA--------------RLGYQARQ 233

  Fly   216 -FTAVKELTYRY---------NATIESVPIPDLPEYDVYLAVAEMLHTKKIDIVCYFKDFSLEVA 270
             ...:.:..::|         |||  ...|.||......||:|..:         |..|.:|.:.
  Fly   234 PLRDMLDCKFKYIFRDRWSDGNAT--GGMIGDLILDKADLAIAPFI---------YSFDRALFLQ 287

  Fly   271 YTAPLSIIREYFMAPHARPISSYL---YYSKPFG---WTLWAVVI---STVLYGTVMLHLAARGA 326
            .....|:.||..|..:.|.:|:.|   .:.:||.   |..:|:::   ..:|:.|.:|....:..
  Fly   288 PITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILERRKQWK 352

  Fly   327 RVEIGKCLLYSLSHILYNCHQKIRVAGWRDVAIHGILTIGGFILTNVYLATLSSILTSGLYDEEY 391
            ...:..|||...:..:.......|..|.| :|...:: :..:::.|.|.:.:.|.|.........
  Fly   353 PSLLTSCLLSFGAGCIQGAWLTPRSMGGR-MAFFALM-VTSYLMYNYYTSIVVSKLLGQPIKSNI 415

  Fly   392 NTLEDLA-------------------RAPYPSLHDEYYRSQMKAKTFLPERLRRNSLSLNATLLK 437
            .||:.||                   .:..|.:.| .||.::......|:::   .:...|.:| 
  Fly   416 RTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRD-LYRKKVLGSKRSPDKI---WIPTEAGVL- 475

  Fly   438 AYRDGLNQSYIYIL-----YEDRLELILMQQYLLKTPRFNMIRQAVGFTLESYCVSNSLP----- 492
            :.||  .:.::||.     ||                   .:|:  .|.....|..|.:|     
  Fly   476 SVRD--QEGFVYITGVATGYE-------------------FVRK--HFLAHQICELNEIPLRDAS 517

  Fly   493 ----YLAMTSEFMR-------RLQEHGISIKMKADTFRELIH--QGIYTLMRDDEPPAKAFDLDY 544
                .||..|.:..       |:.|.|:..|.:.......:|  |..:|:         |..|:|
  Fly   518 HTHTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQHNHTV---------AVGLEY 573

  Fly   545 YFFAFVLWTVGLISSLLVFFAELV 568
            ....|::....:|..:.:...|::
  Fly   574 AAPLFIILLGAIILCMGILGLEVI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60eNP_611927.3 None
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 66/340 (19%)
Lig_chan 343..585 CDD:278489 48/280 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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