DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60e and Ir68b

DIOPT Version :9

Sequence 1:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:654 Identity:126/654 - (19%)
Similarity:236/654 - (36%) Gaps:169/654 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VQVLQDLNLALQTELNVFIDF-----ECCATSEI--------LHKLDSPRILLSSNSREARDLR- 78
            :..|.::...:..|.||.:.:     .|.|:.:.        |::....|:.:.:.:.||.:|. 
  Fly    16 IYALAEIACRIAVEQNVQVTYLYRCASCPASFDADYSALELDLYRCVGSRLPVITRNMEAHELEP 80

  Fly    79 IRGNFTESTLIIVSVMDSDLNPLVASLLPRLLDEL---------------------HELHIVFLS 122
            .|...:.|...|.:....|      ||:.|:||.|                     |:|..:|..
  Fly    81 FRRTDSLSIFQIPAAEKGD------SLVRRILDMLNPHQRRKHMHKYLFVWPNAGRHQLLRLFRG 139

  Fly   123 NEEPGFPKQDLYTYCFKEGFVNVILMSGK--GLYSYLPYP--SIQPIS-LSNVSEYFDRARIIRN 182
            :    :.|:.||.          :.::|:  |.:.:.|:.  .:|.|. |.....|   ||.:::
  Fly   140 S----WAKKLLYG----------LAITGRENGTFDFDPFAWGGLQVIQRLDGEVPY---ARKVKD 187

  Fly   183 FQGFPVRILRSTLAPRDFEYSNEQGGLVRAGYLFTAVKELTYR-----YNATIESVPIPD----- 237
            .:|:|:|....|    |...:..:..:..|||  .||..:..|     .||::..| .|:     
  Fly   188 LRGYPLRFSMFT----DPLMAMPRSPVETAGY--QAVDGVAARVVGEMLNASVTYV-FPEDNESY 245

  Fly   238 ---LPEYDVYLAVAEML--HT-----KKIDIVCYFKDFSLEVAYTAPLSIIREYFMAPHARPISS 292
               ||..:....|::::  ||     .:..:.|.:.  ::||.|  |.:....:.:.|.:.....
  Fly   246 GRCLPNGNYTGVVSDIVGGHTHFAPNSRFVLDCIWP--AVEVLY--PYTRRNLHLVVPASAIQPE 306

  Fly   293 YLYYSKPFGWTLWAVVIST----VLYGTVMLHLAARGAR--VEIGKCLLYSLSHILYNCH----- 346
            ||.:.:.|..|:|.:::.|    ||...||..|..|..|  |...:...|.:..:....|     
  Fly   307 YLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQATWYEILEMFGKTHVGEPA 371

  Fly   347 --------QKIRVAGWRDVAIHGILTIGGFILTNVYLATLSSILTSGLYDEEYNTLEDLARA--- 400
                    .:..:.||         .:..::|:.:|.|.|.|......|:|:.:.::||...   
  Fly   372 GRLSSFSSMRTFLMGW---------ILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVH 427

  Fly   401 --PYPSLHDEYYRSQMKAKTF--LPERLRRNSLSLNATLLK------------AYRDGLNQSYIY 449
              ...:::|. .||.:....:  |..|.|:..|.:..:..:            ..||...:.::.
  Fly   428 IYAVTTMYDA-VRSALTEHQYGLLENRSRQLPLGIATSYYQPVVRRRDRRAAFIMRDFHARDFLA 491

  Fly   450 ILYEDRLELILMQQYLLKTPRFNMIRQAVGFTLESYCVSNSLPYLAMTSEFMRRLQEHG------ 508
            |.|:.:.|          .|.:::.|:.:...:.:|.:....|:|...........|||      
  Fly   492 ITYDSQAE----------RPAYHIAREYLRSMICTYILPRGSPFLHRLESLYSGFLEHGFFEHWR 546

  Fly   509 -------ISIKMKADTFRELIHQGIYTLMRDDEPPAK----AFDLDYYFFAFVLWTVGLISSLLV 562
                   :.....|:.|.|.:.....|....:|...:    ...||....||.||:||:..|.|.
  Fly   547 QMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYLWSVGIGISCLG 611

  Fly   563 FFAE 566
            |..|
  Fly   612 FAVE 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60eNP_611927.3 None
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 52/293 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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