DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60e and Ir40a

DIOPT Version :9

Sequence 1:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:745 Identity:143/745 - (19%)
Similarity:244/745 - (32%) Gaps:238/745 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVSVLLCLVGASDSE-----SMQVQVLQDLNLAL-------------QTELNVFIDFECCATSE 55
            ||.|..|..:|..:|:     :..|:.||..:||:             |.|.||::|    ...:
  Fly    16 LLNSTRLTFIGNDESDTAIALTQIVRGLQQSSLAILALPSLALSDGVCQKERNVYLD----DFLQ 76

  Fly    56 ILHKLDSPRILLSSNSREARDLRIRGNFTESTLIIVSVMDSDLNPLVASLLPRLLDELHELHIVF 120
            .||:.:...::.|..  |.....|..|...:...|..::| :.|.|:.||..|.|.....|.|.:
  Fly    77 RLHRSNYKSVVFSQT--ELFFQHIEENLQGANECISLILD-EPNQLLNSLHDRHLGHRLSLFIFY 138

  Fly   121 LSNEEPGFPKQDLYTYCFKEGFVNVILMSGKGLYSYLPYPSIQPISLSNVS--EYFD-------- 175
            .....|  |...:..  |:|....|::...:.....:.|...:|.|.|.:.  .::|        
  Fly   139 WGARWP--PSSRVIR--FREPLRVVVVTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQR 199

  Fly   176 ------RARIIRNFQG--FPVRILRS------TLAPRDFEYSNEQGGL---------VRAG---- 213
                  ...:..||:|  |.|.:..|      |.....||...|...|         |..|    
  Fly   200 IPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHR 264

  Fly   214 YLFTAVKELTYRY------NATIESVPIPD-LPEYDVYLAVAEMLHTKKIDIVCYFKDFSLEVAY 271
            .|....|.:.:|:      ..|..|:...| ....|.:.....:|.:.:.|.  :..|..|  ::
  Fly   265 LLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADF--FLGDVGL--SW 325

  Fly   272 TAPLSIIREYF-------MAPHA-RPISSYLYYSKPFGWTLWAVVISTVL------YGTVMLHLA 322
            ....:|...:|       .|.|| |.::..|...:||...:|..:|.|::      ||.:.|...
  Fly   326 ERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYI 390

  Fly   323 AR----GARVE-IG------------------------------------KCLLYSLSHIL-YNC 345
            .|    .:.|| :|                                    ||:.::|...| .:|
  Fly   391 WRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSC 455

  Fly   346 HQKIRVAGWRDVAIHG-----ILTI-----GGFILTNVYLATLSSILTSGLYDEEYNTLEDLARA 400
            ::           :|.     .|||     ..::|.:||.|.|:|.......:...|||:.|..|
  Fly   456 NE-----------LHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAA 509

  Fly   401 PYPSLHDEYYRSQMKAKTFLPERLRRNSLSLNATLLKAYRDGLNQSYIYILYEDRLELILMQQYL 465
               .:||.|             ||.....|.:..:|:...:...|.|           .||:|.:
  Fly   510 ---MIHDGY-------------RLYVEKESSSLEMLENGTELFRQLY-----------ALMRQQV 547

  Fly   466 LKTPRFNMI----------------------RQAVGFTLESYCVSN------------------S 490
            :..|:...|                      |:.:.|.::.|..:|                  .
  Fly   548 INDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIG 612

  Fly   491 LPYLAMTSEFMRRLQEHGISIKMK----ADTFRELIHQGIY---TLMRDDEPPAKAFDLDYYFF- 547
            .|:|...:..:.:|.|.||..||.    |..::|:....||   ...::.|..::....|.... 
  Fly   613 CPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVIS 677

  Fly   548 ---------AFVLWTVGLISSLLVFFAELV 568
                     ||:...||.:::.::...|:|
  Fly   678 PLNLRMLQGAFIALGVGSLAAGVILLLEIV 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60eNP_611927.3 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 23/125 (18%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/97 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 31/167 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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