DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60e and Ir52c

DIOPT Version :9

Sequence 1:NP_611927.3 Gene:Ir60e / 37917 FlyBaseID:FBgn0035019 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:665 Identity:131/665 - (19%)
Similarity:229/665 - (34%) Gaps:200/665 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVSVLLCLVGASDSESMQVQVLQDLNL---------ALQTELN---VFIDFECCATSEILHKLDS 62
            |:.:|.|| |.|.|:.:.|.....|:.         .||.|.:   :.:..|.||...:..:|..
  Fly     4 LIIILFCL-GNSSSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERLQV 67

  Fly    63 PRILLSSNSREARDLRIRGNFTESTLIIVSVMDSDLNPLVASLLP-----RLLDELHELHIV--- 119
            |.:|:||.|     .....||:..|||:......:......:|:.     ||:  |.:.||.   
  Fly    68 PAVLVSSGS-----TNFDWNFSSLTLILSCNFQDEREENYRTLMKLQTSRRLI--LLKGHIKPES 125

  Fly   120 ---FLSNEEP---GFPKQDLY----TYCFK----EGFVNVILMSGKGLYSYLPYPSIQPISLSNV 170
               |.|.:|.   ...|::.|    .|..:    :.:..:.|..||.:|.               
  Fly   126 VCDFYSKKEQHNVAMVKENFYQLEVVYSCRLFQDQNYEKLNLFDGKSIYK--------------- 175

  Fly   171 SEYFDRARIIRNFQGFPVRILRSTLAPRDFEYSNEQGGLVR-AGYLFTAVKELTYRYNATI---- 230
                |:   .||..|.|:|.|.....||...|.:.:.|..: .||:...:.:...:.|||:    
  Fly   176 ----DQ---FRNMHGAPIRTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQIRE 233

  Fly   231 ------ESVPIPDLPEY------DVYLAVAEMLHTKKIDIVCYFKDFSLEVAYTAPLSIIREYFM 283
                  |.|...|:..:      |:.:..|..|.....|.:.|            |..:....||
  Fly   234 DLIKDDEEVSFVDITNFTSNDILDIGICEARTLEMSNYDAISY------------PYLMSSYCFM 286

  Fly   284 APHARPISSYLYYSKPFGWTLWAVVISTVLY---------GTVMLHLAARGARVEIGKCLLYSLS 339
            ||        |..|.||.....|:|..::|.         ..:::::..|..|         ||:
  Fly   287 AP--------LPDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYR---------SLT 334

  Fly   340 HILYNCHQKIRVAGWRDVAIHGILT---------------------IGGFILTNVYLATLSSILT 383
                     ||.....|:.:.|.|.                     ....|.|.:|.|.|.:.|.
  Fly   335 ---------IRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLW 390

  Fly   384 SGLYDEEYNTLEDLARAPYPSLHDEYYRSQMKAKTFLPERLRRNSLSLNATL--LKAY------- 439
            ....:....:.:|:.::.|....:.|.|..::|              ||.:|  ::.|       
  Fly   391 GPPIEPRLTSFDDVKKSRYTMAINIYEREFLEA--------------LNVSLEDVEIYDYGKFSK 441

  Fly   440 -RDGLNQSYIYILYEDRLELILMQQYLLKTPRFNMIRQAVGFTLESYCVS----------NSLPY 493
             |...|.:|::.:...:...|..:|.|.|...|        :..:::|::          ..|||
  Fly   442 LRSTFNTNYLFPVTALQWFTINEEQKLFKYKIF--------YYCDAFCLNQFDILSIPLRRHLPY 498

  Fly   494 LAMTSEFMRRLQEHGISIKMKADTFRELIHQGIYTLMRDDEPPAKAFDLDY-----YFFAFVLWT 553
            ..:..|.|...:|.|::......::|::|...: |..:|..|   ..:.||     .::.|.::.
  Fly   499 RDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANL-TTFKDFSP---LLENDYIEVHNLYWVFTMYF 559

  Fly   554 VGLISSLLVFFAELV 568
            ||:...|..|..|::
  Fly   560 VGMGMGLCFFILEIL 574



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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