Protein Alignment CG4612 and HRP1

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 319
• Identity: 68/319 - (21%)
• Similarity: 119/319 - (37%)
• Gaps: 91/319 - (28%)

  Fly    50 GGGHAASNHLAAAAVLGR--------HGHNSLGSGHTSTSSHSANVGV----------------- 89
            |.|.:..:.|||...|..        :.:||..:.....:|.|...|.
Yeast    33 GSGTSQLDQLAALQALSSSLNKLNNPNSNNSSSNNSNQDTSSSKQDGTANDKEGSNEDTKNEKKQ 97

  Fly    90 --GVGGGALASGSTGGSGG-----------------NSSP-------------------DSGKIY 116
              .....|.|:.|:.|..|                 :.||                   :|.|::
Yeast    98 ESATSANANANASSAGPSGLPWEQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKESCKMF 162

  Fly   117 I--KNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFVHFDSEEAARAAIEKVNGMLC 178
            |  .|.:.:.||...|  |..:|.:.:..:.|| ..|.|||:||:.|:...:....::..:  :.
Yeast   163 IGGLNWDTTEDNLREY--FGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQH--IL 223

  Fly   179 NNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE-GRS 242
            :.:.:...:.|||  .||:|.   ..::|..:..:...:...|.|..:|.|...:||||:: |:|
Yeast   224 DGKVIDPKRAIPR--DEQDKT---GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQS 283

  Fly   243 RRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKA 301
            |.||||.|::..:.         .::..|||      :...:|:.||.|......:||:
Yeast   284 RGFGFVTYDSADAV---------DRVCQNKF------IDFKDRKIEIKRAEPRHMQQKS 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	16/72 (22%)
		RRM3_I_PABPs	202..282	CDD:240826	20/80 (25%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	50/208 (24%)
		RRM1_Hrp1p	161..236	CDD:409991	17/78 (22%)
		RRM2_Hrp1p	244..321	CDD:409767	24/91 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910