Protein Alignment CG4612 and RNP1

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_013054.1
• Gene: RNP1 / 850680
• SGDID: S000003969
• Length: 249
• Species: Saccharomyces cerevisiae
• Alignment Length: 132
• Identity: 35/132 - (26%)
• Similarity: 69/132 - (52%)
• Gaps: 10/132 - (7%)

  Fly   170 IEKVNGMLCNNQKVHVVKFIPRRDREQEKATH-FKNLYVKNLSEEFTEQHLREMFEP-YGRITSH 232
            ||::.....|.:|...|  :|...:.:::..: .:.|||.||.:...:|.||::||| ||:||.:
Yeast     3 IEEIEFYNVNGKKTTTV--VPENTKIKKRVLNDRRTLYVGNLPKNCRKQDLRDLFEPNYGKITIN 65

  Fly   233 KLMLDEEGRS---RRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLE 294
              ||.::...   :||.|:.::...:.......::|| :..|:.:.:...|:|.|:..|.|:|..
Yeast    66 --MLKKKPLKKPLKRFAFIEFQEGVNLKKVKEKMNGK-IFMNEKIVIENILTKEEKSFEKNQKSN 127

  Fly   295 ER 296
            ::
Yeast   128 KK 129

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	4/14 (29%)
		RRM3_I_PABPs	202..282	CDD:240826	24/83 (29%)
RNP1	NP_013054.1	RRM	<22..224	CDD:223796	29/111 (26%)
		RRM	36..109	CDD:214636	23/75 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910