DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and PAB5

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_001185373.1	Gene:	PAB5 / 843507	AraportID:	AT1G71770	Length:	682	Species:	Arabidopsis thaliana

Alignment Length:	199	Identity:	94/199 - (47%)
Similarity:	134/199 - (67%)	Gaps:	9/199 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   107 NSSPDS-----GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAA 166
            |..|.:     |.::||||:.||||||:|:|||.||.||:|.||.|..|.|:|||||.|:.||.|
plant   135 NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETA 199

  Fly   167 RAAIEKVNGMLCNNQKVHVVKFIPRRDR---EQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGR 228
            :|||:|:||||.|:::|.|..|:.|:||   |......|.|:|||||.:|.|:..|::.|..||.
plant   200 QAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGD 264

  Fly   229 ITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
            |:|..:|.|:.|.||.||||.:.:|::|..||..::|..||:: .|||.||..|::|::|:.||.
plant   265 ISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGED-VLYVGRAQKKSDREEELRRKF 328

  Fly   294 EERK 297
            |:.:
plant   329 EQER 332

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	43/69 (62%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	36/79 (46%)
PAB5	NP_001185373.1	PABP-1234	59..661	CDD:130689	94/199 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	103	1.000	Domainoid score	I2252
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100425
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.920