Protein Alignment CG4612 and PAB8

DIOPT Version :10

• Sequence 1: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_564554.1
• Gene: PAB8 / 841399
• AraportID: AT1G49760
• Length: 671
• Species: Arabidopsis thaliana
• Alignment Length: 323
• Identity: 115/323 - (35%)
• Similarity: 165/323 - (51%)
• Gaps: 50/323 - (15%)

  Fly    27 LAAAHHQQQLHHHAAAAGHLSHVGGGHAASNHLAAAAVLGRHGHNSLGSGH---TSTSSH----- 83
            :|...||.|..:...|....:......||:...||||...:.|..||..|.   |.|.|.
plant     1 MAQIQHQGQNANGGVAVPGAAAAEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAF 65

  Fly    84 ---SANVGVGVGGGALASGSTG-GSGGNSSPDS-------------------------------- 112
               ...|.|.|........|.| |....::|..
plant    66 TQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKS 130

  Fly   113 --GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNG 175
              |.|:||||::|||:||:::|||.||.||:|.||.|..|.|:|||||.:|::|||:.||:|:||
plant   131 GVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNG 195

  Fly   176 MLCNNQKVHVVKFIPR--RDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDE 238
            ||.|:::|:|..|:.:  ||...|| ..|.|:|||||||..:::.|.::|..:|..||..:|.|.
plant   196 MLLNDKQVYVGPFVHKLQRDPSGEK-VKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG 259

  Fly   239 EGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKA 301
            ||:|:.||||.:||...|..||..|:||.. |:|..:|.:|..|:||:.|:.:|.|:..::.|
plant   260 EGKSKGFGFVNFENSDDAARAVDALNGKTF-DDKEWFVGKAQKKSERETELKQKFEQSLKEAA 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	89/189 (47%)
PAB8	NP_564554.1	PABP-1234	46..646	CDD:130689	103/278 (37%)