DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and SR34

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_850933.1	Gene:	SR34 / 839262	AraportID:	AT1G02840	Length:	303	Species:	Arabidopsis thaliana

Alignment Length:	231	Identity:	49/231 - (21%)
Similarity:	83/231 - (35%)	Gaps:	48/231 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   108 SSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEK 172
            ||..|..:|:.||...|..:.|.|.||.:|.::..::....  ...||.||.||....|..||..
plant     2 SSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPP--RPPGYAFVEFDDARDAEDAIHG 64

  Fly   173 VNGMLCNNQKVHV-VKFIPRR------------------------DREQEKATHFKNLYVKNLSE 212
            .:|...:..::.| :....||                        .|...:.:.|:.| |..|..
plant    65 RDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVL-VTGLPS 128

  Fly   213 EFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFL--- 274
            ..:.|.|::.....|.:...::..|..|.:....:..||:.:.||        |:|.|.:|.
plant   129 SASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL--------KKLDDTEFRNAF 185

  Fly   275 ---------YVARALSKAERQQEINRKLEERKRQKA 301
                     |.:|..|::..:.....|...|.|.::
plant   186 SNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRS 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	19/69 (28%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	19/91 (21%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:241043	20/72 (28%)
SR34	NP_850933.1	RRM2_SF2_plant_like	119..194	CDD:241046	17/83 (20%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910