DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and SR30

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_172386.3	Gene:	SR30 / 837433	AraportID:	AT1G09140	Length:	268	Species:	Arabidopsis thaliana

Alignment Length:	214	Identity:	49/214 - (22%)
Similarity:	80/214 - (37%)	Gaps:	31/214 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGMLCN 179
            ||:.||...|....|.|.|..:|.|::.::....  ...||.||.|:....|..||...:|...:
plant     9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPP--RPPGYAFVEFEDPRDADDAIYGRDGYDFD 71

  Fly   180 NQKVHVV------KFIPRRDR-----EQEKATHFKNLY---VKNLSEEFTEQHLREMFEPYGRIT 230
            ..::.|.      :|.|..||     ...:|...::.|   |..|....:.|.|::.....|.:.
plant    72 GCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVC 136

  Fly   231 SHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFL--------YVARALSKAERQQ 287
            ..::..|.:|.|   |.|.|.|......|:..|...:. .|.|.        |.:|::|   |..
plant   137 FSEVFPDRKGMS---GVVDYSNYDDMKYAIRKLDATEF-RNAFSSAYIRVREYESRSVS---RSP 194

  Fly   288 EINRKLEERKRQKAGQIFY 306
            :.::....|.|.:.....|
plant   195 DDSKSYRSRSRSRGPSCSY 213

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	19/69 (28%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	19/90 (21%)
SR30	NP_172386.3	RRM	<1..165	CDD:223796	39/160 (24%)
		RRM1_SF2_plant_like	8..79	CDD:241043	20/71 (28%)
		RRM2_SF2_plant_like	109..184	CDD:241046	17/78 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910