Protein Alignment CG4612 and RBP45A

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_568815.1
• Gene: RBP45A / 835581
• AraportID: AT5G54900
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 358
• Identity: 77/358 - (21%)
• Similarity: 128/358 - (35%)
• Gaps: 117/358 - (32%)

  Fly    34 QQLHHHAAAAGHLSHVGGGHAASNHL--------------AAAAVLGRHGHNSLGSGHTSTSSHS 84
            ||...:||.||.:.      :...||              .:||.||:|.: .:||.:..::|..
plant     2 QQPPSNAAGAGQIP------SGQQHLWMMMQQQQQQQQMQLSAAPLGQHQY-GIGSQNPGSASDV 59

  Fly    85 ANVGVG---------------VGGGALASGS------TGGSGG-------------------NSS 109
            .::.:|               ...|...|..      ||.|.|                   |.:
plant    60 KSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGA 124

  Fly   110 P---------------DSGK-----------IYIKNLERSIDNKAVYDTF-SVFGNILNCNVAKD 147
            |               .:|:           |::.:|...:.:..:.||| :|:|::....|..|
plant   125 PMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLD 189

  Fly   148 E-DGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHV-----VKFIPRR-------------D 193
            . .|.|:|||||.|..|.....|:.::||..|:.:.:.:     ...:|.:             |
plant   190 RTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGD 254

  Fly   194 REQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALA 258
            .:....|    ::|..|....|:..|:.:|..:|.:...|:     ...:|.|||.|.|..||..
plant   255 NDPNNTT----IFVGGLDANVTDDELKSIFGQFGELLHVKI-----PPGKRCGFVQYANKASAEH 310

  Fly   259 AVIGLHGKQLGDNKF-LYVARALSKAERQQEIN 290
            |:..|:|.|||.... |...|:.:|...|.:.|
plant   311 ALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWN 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	22/71 (31%)
		RRM3_I_PABPs	202..282	CDD:240826	23/80 (29%)
RBP45A	NP_568815.1	RRM1_SECp43_like	61..138	CDD:409780	9/76 (12%)
		RRM2_SECp43_like	153..232	CDD:409781	22/78 (28%)
		RRM3_NGR1_NAM8_like	259..330	CDD:409782	23/79 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910