DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and AT3G14100

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_188026.1	Gene:	AT3G14100 / 820626	AraportID:	AT3G14100	Length:	427	Species:	Arabidopsis thaliana

Alignment Length:	209	Identity:	52/209 - (24%)
Similarity:	98/209 - (46%)	Gaps:	30/209 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   115 IYIKNLERSIDNKAVYDTFSVFGNILNCN-VAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGMLC 178
            :|:.|:...:....:.:.|:..|.:.:.. :.||:.    .|||||:....:|..||..:||...
plant    61 VYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKS----SYGFVHYFDRRSAALAILSLNGRHL 121

  Fly   179 NNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE-GRS 242
            ..|.:. |.:.....:.::.::|| |::|.:||.|.|:..|.:.|..:...:..::|.|:: |||
plant   122 FGQPIK-VNWAYATGQREDTSSHF-NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRS 184

  Fly   243 RRFGFVAYENPQSALAAVIGLHGKQL----------------GDNKFLYVARAL------SKAER 285
            |.||||::.|.|.|..|:..::||.|                ||:|.....:::      |..:.
plant   185 RGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDG 249

  Fly   286 QQEINRKLEERKRQ 299
            ::.:|.:..|...|
plant   250 KETLNEETPENNSQ 263

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	17/70 (24%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	29/102 (28%)
AT3G14100	NP_188026.1	RRM1_TIA1_like	61..131	CDD:240798	18/74 (24%)
		ELAV_HUD_SF	70..323	CDD:273741	50/200 (25%)
		RRM2_PUB1	145..219	CDD:241063	25/73 (34%)
		RRM3_TIA1_like	265..340	CDD:240800
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910