Sequence 1: | NP_001246493.1 | Gene: | CG4612 / 37914 | FlyBaseID: | FBgn0035016 | Length: | 307 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_850472.1 | Gene: | AT2G47310 / 819344 | AraportID: | AT2G47310 | Length: | 512 | Species: | Arabidopsis thaliana |
Alignment Length: | 317 | Identity: | 68/317 - (21%) |
---|---|---|---|
Similarity: | 113/317 - (35%) | Gaps: | 52/317 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 FRGNP---ANYHQQQPALNHHTLAAAHHQQQLHHHAAAAGHLSHVGGGHAASNHLAAAAVLGRHG 69
Fly 70 HNSLGSGHTSTSSHSANV-----GVGVGGGALASGSTGGSGGNSSPDSGKIYIKNLERSIDNKAV 129
Fly 130 YDTFSVFGNILNCNVAKDE-DGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVVK------ 187
Fly 188 ------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFG 246
Fly 247 FVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKAGQ 303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4612 | NP_001246493.1 | RRM2_I_PABPs | 115..185 | CDD:240825 | 13/70 (19%) |
RRM3_I_PABPs | 202..282 | CDD:240826 | 23/79 (29%) | ||
AT2G47310 | NP_850472.1 | RRM_SF | 111..190 | CDD:418427 | 16/78 (21%) |
RRM_SF | 208..287 | CDD:418427 | 25/97 (26%) | ||
WW | 406..432 | CDD:395320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |