Protein Alignment CG4612 and PAB4

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_179916.1
• Gene: PAB4 / 816867
• AraportID: AT2G23350
• Length: 662
• Species: Arabidopsis thaliana
• Alignment Length: 196
• Identity: 88/196 - (44%)
• Similarity: 131/196 - (66%)
• Gaps: 9/196 - (4%)

  Fly   108 SSPDS-------GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEA 165
            ||.||       |.:::|||::|:|||.:::.||..|.|::|.||.|..|.|||||||.||:|::
plant   122 SSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDS 186

  Fly   166 ARAAIEKVNGMLCNNQKVHVVKFIPRRDREQ-EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRI 229
            |:.||||:||.:.|::::.|..|:.:.:||. .....|.|:|||||||..|:..|:..|..||.|
plant   187 AKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSI 251

  Fly   230 TSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLE 294
            :|..:|.|.:|:||.||||.:|||:.|..||..|:||:. |:|..||.:|..|:||:.|::|:.|
plant   252 SSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKF-DDKEWYVGKAQKKSERELELSRRYE 315

  Fly   295 E 295
            :
plant   316 Q 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	34/69 (49%)
		RRM3_I_PABPs	202..282	CDD:240826	39/79 (49%)
PAB4	NP_179916.1	PABP-1234	47..631	CDD:130689	88/196 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100425
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.920