Protein Alignment CG4612 and Hnrnpd

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_077380.2
• Gene: Hnrnpd / 79256
• RGDID: 620365
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 284
• Identity: 72/284 - (25%)
• Similarity: 125/284 - (44%)
• Gaps: 58/284 - (20%)

  Fly    50 GGGHAASNHLAAAAVLGRHGHNSLGSGHTSTSSHSANVGVGVGGGALASGSTGGS---------- 104
            ||..||:   ||.|.:|.......|:...:....:|..|.|.|||:...|:.|||
  Rat     7 GGDGAAA---AATAAVGGSAGEQEGAMVAAAQGAAAAAGSGSGGGSAPGGTEGGSTEAEGAKIDA 68

  Fly   105 --------GGNSSP----------DSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DG 150
                    ..||||          :..|::|..|......|.:.|.||.||::::|.:..|. .|
  Rat    69 SKNEEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITG 133

  Fly   151 NSRGYGFVHFDSEEAARAAIE----KVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLS 211
            .|||:|||.|...|:....::    |:||.:.:          |:|.:..:.....|.::|..||
  Rat   134 RSRGFGFVLFKESESVDKVMDQKEHKLNGKVID----------PKRAKAMKTKEPVKKIFVGGLS 188

  Fly   212 EEFTEQHLREMFEPYGRITSHKLMLDEEGRSRR-FGFVAYENPQSALAAVIGLHGKQLGDNKFLY 275
            .:..|:.:||.|..:|.:.|.:|.:|.:...|| |.|:.::..:..         |::.:.|:..
  Rat   189 PDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPV---------KKIMEKKYHN 244

  Fly   276 VARALSKAERQQEINRKLEERKRQ 299
            |  .|||.|.:..::::..::::|
  Rat   245 V--GLSKCEIKVAMSKEQYQQQQQ 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	22/74 (30%)
		RRM3_I_PABPs	202..282	CDD:240826	20/80 (25%)
Hnrnpd	NP_077380.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..89		23/84 (27%)
		CBFNT	<55..76	CDD:285369	3/20 (15%)
		RRM1_hnRNPD_like	97..170	CDD:241019	23/82 (28%)
		RRM2_hnRNPD	181..255	CDD:241027	22/84 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	1	0.960