Protein Alignment CG4612 and Cstf2

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_038955991.1
• Gene: Cstf2 / 683927
• RGDID: 1596566
• Length: 624
• Species: Rattus norvegicus
• Alignment Length: 115
• Identity: 33/115 - (28%)
• Similarity: 63/115 - (54%)
• Gaps: 12/115 - (10%)

  Fly   189 IPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE-GRSRRFGFVAYEN 252
            :|.||...:::  .::::|.|:..|.||:.|:::|...|.:.|.:|:.|.| |:.:.:||..|::
  Rat     4 LPVRDPAVDRS--LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66

  Fly   253 PQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKAG 302
            .::||:|:..|:|::       :..|||.......|.|:  ||.|....|
  Rat    67 QETALSAMRNLNGRE-------FSGRALRVDNAASEKNK--EELKSLGTG 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825
		RRM3_I_PABPs	202..282	CDD:240826	24/80 (30%)
Cstf2	XP_038955991.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	24/92 (26%)
		CSTF2_hinge	112..191	CDD:405077
		PRK14718	<444..>501	CDD:173181
		CSTF_C	580..620	CDD:405061

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910