DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4612 and PABPC1L2B

DIOPT Version :10

Sequence 1:NP_611924.1 Gene:CG4612 / 37914 FlyBaseID:FBgn0035016 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001035971.1 Gene:PABPC1L2B / 645974 HGNCID:31852 Length:200 Species:Homo sapiens


Alignment Length:108 Identity:50/108 - (46%)
Similarity:72/108 - (66%) Gaps:4/108 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGML 177
            |.::||||.::|||||:|:.||.|||||:|.||.||.| .:|||||||..:|:|..||:.:|||.
Human    90 GNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMF 153

  Fly   178 CNNQKVHVVKFIPRRDREQEK---ATHFKNLYVKNLSEEFTEQ 217
            .|.:|:.|.:|...::||.|:   |....:..||:..|:..|:
Human   154 LNYRKIFVGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4612NP_611924.1 PABP-1234 115..>303 CDD:130689 49/106 (46%)
PABPC1L2BNP_001035971.1 PABP-1234 2..>196 CDD:130689 49/106 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..200 8/27 (30%)

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