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Protein Alignment CG4612 and PABPC1L2B
DIOPT Version :9
Sequence 1: | NP_001246493.1 |
Gene: | CG4612 / 37914 |
FlyBaseID: | FBgn0035016 |
Length: | 307 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001035971.1 |
Gene: | PABPC1L2B / 645974 |
HGNCID: | 31852 |
Length: | 200 |
Species: | Homo sapiens |
Alignment Length: | 108 |
Identity: | 50/108 - (46%) |
Similarity: | 72/108 - (66%) |
Gaps: | 4/108 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGML 177
|.::||||.::|||||:|:.||.|||||:|.||.||.| .:|||||||..:|:|..||:.:|||.
Human 90 GNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMF 153
Fly 178 CNNQKVHVVKFIPRRDREQEK---ATHFKNLYVKNLSEEFTEQ 217
.|.:|:.|.:|...::||.|: |....:..||:..|:..|:
Human 154 LNYRKIFVGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1027234at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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