Protein Alignment CG4612 and Srek1

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_006231954.2
• Gene: Srek1 / 56763
• RGDID: 621696
• Length: 610
• Species: Rattus norvegicus
• Alignment Length: 109
• Identity: 31/109 - (28%)
• Similarity: 51/109 - (46%)
• Gaps: 8/109 - (7%)

  Fly   203 KNLYVKNL-SEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGK 266
            :.:||.|| |:..|...|.|.|:..|.:...: |..:|.:..||.||.:.: |:::...:..:|.
  Rat   185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR-MAGDETQPTRFAFVEFAD-QNSVPRALAFNGV 247

  Fly   267 QLGDN--KFLYVARALSKAERQ--QEINRKLEE-RKRQKAGQIF 305
            ..||.  |..:...|:.|....  |...::||| .||.:..|.|
  Rat   248 MFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSF 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825
		RRM3_I_PABPs	202..282	CDD:240826	22/81 (27%)
Srek1	XP_006231954.2	RRM1_SREK1	20..99	CDD:409941
		RRM2_SREK1	181..266	CDD:409705	22/82 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910