DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and Celf3

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	XP_038958836.1	Gene:	Celf3 / 499669	RGDID:	1563168	Length:	526	Species:	Rattus norvegicus

Alignment Length:	184	Identity:	47/184 - (25%)
Similarity:	90/184 - (48%)	Gaps:	15/184 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   110 PDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DGNSRGYGFVHF---DSEEAARAAI 170
            ||:.|:::..:.|.::.|.:...|..||.|....|.||: .|..:|..|:.:   ||...|::|:
  Rat     4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68

  Fly   171 EKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLM 235
            .:...:...|:.:.|      :..:.|.....:.|:|..|.::.|::.:|:||||:|.|....::
  Rat    69 HEQKTLPGMNRPIQV------KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVL 127

  Fly   236 LDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEI 289
            ...:|.|:...||.::....|.||:..||     .::.|..||..::..|:|.:
  Rat   128 RGPDGTSKGCAFVKFQTHAEAQAAINTLH-----SSRTLPEARGKTRPPREQTL 176

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	17/73 (23%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	23/79 (29%)
Celf3	XP_038958836.1	RRM1_CELF3_4_5_6	2..88	CDD:410041	21/89 (24%)
		RRM2_CELF3_4_5_6	94..199	CDD:410043	25/88 (28%)
		minC	<242..>376	CDD:178806
		RRM3_CELF3_4_5_6	437..515	CDD:241083
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910