Protein Alignment CG4612 and Syp

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Alignment Length: 207
• Identity: 54/207 - (26%)
• Similarity: 110/207 - (53%)
• Gaps: 25/207 - (12%)

  Fly   105 GGNSSPDSGKIYIKNLERSIDNKAVYDTFS-----VFGNILNCNVAKDEDGNSRGYGFVHFDSEE 164
            |...|.::.::::.|:.::.|...:.:.||     ::..|:..  :.|:...:||:.|:.::|.:
  Fly   279 GVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYS--SPDDKKKNRGFCFLEYESHK 341

  Fly   165 AARAAIEKV-NGMLCNNQKVHVVKFI-----PRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
            ||..|..:: .|.:    ||.....|     |:.:.:::..:..|.|||:||:::.:|..|:|.|
  Fly   342 AASLAKRRLGTGRI----KVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQF 402

  Fly   224 EPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG-DNKFLYVARALSKAERQQ 287
            |.||::...|.:.|       :.|:.:|:..||:.|:.||:||::| .|..:.:|:..|..::::
  Fly   403 EQYGKVERVKKIKD-------YAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKE 460

  Fly   288 EINRKLEERKRQ 299
            ||.|..|.|..|
  Fly   461 EILRARERRMMQ 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	16/75 (21%)
		RRM3_I_PABPs	202..282	CDD:240826	27/80 (34%)
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695	1/3 (33%)
		RRM2_hnRNPR_like	286..367	CDD:240696	17/86 (20%)
		RRM3_hnRNPR_like	381..452	CDD:240697	27/77 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910