Protein Alignment CG4612 and pabpc1b

DIOPT Version :10

• Sequence 1: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_957176.1
• Gene: pabpc1b / 393856
• ZFINID: ZDB-GENE-050308-1
• Length: 634
• Species: Danio rerio
• Alignment Length: 191
• Identity: 97/191 - (50%)
• Similarity: 137/191 - (71%)
• Gaps: 5/191 - (2%)

  Fly   113 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGML 177
            |.|:||||::||||||:|||||.|||||:|.|..||:| |:|||||||:::|||..||||:||||
Zfish    99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 162

  Fly   178 CNNQKVHVVKFIPRRDREQE---KATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE 239
            .|::||.|.:|..|::||.|   :|..|.|:|:||..|:..:..|:::|..||...|.::|.||.
Zfish   163 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDEN 227

  Fly   240 GRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQK 300
            |:||.||||::|..:.|..||..::||:: :.|.:||.||..|.|||.|:.||.|:.|:.:
Zfish   228 GKSRGFGFVSFERHEDAQRAVDEMNGKEM-NGKLIYVGRAQKKVERQTELKRKFEQMKQDR 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	96/189 (51%)
pabpc1b	NP_957176.1	PABP-1234	11..613	CDD:130689	97/191 (51%)