DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and hfp

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_525123.2	Gene:	hfp / 38173	FlyBaseID:	FBgn0028577	Length:	637	Species:	Drosophila melanogaster

Alignment Length:	179	Identity:	46/179 - (25%)
Similarity:	93/179 - (51%)	Gaps:	15/179 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   114 KIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DGNSRGYGFVHFDSEEAARAAIEKVNGML 177
            ::|:.::...:....:...|:.||.|.:.|::.|. ....:|:.||.::..|.|:.|:|::||.|
  Fly   131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAL 195

  Fly   178 CNNQKVHVVK--FIPRR----DREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLML 236
            ...:.:.|.:  .:|:.    |..||:|..|..:||.::..:.:|:.::.:||.:|.|...||
  Fly   196 MGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKL-- 258

  Fly   237 DEEGRS----RRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
             .:|.|    :.:||:.|.|.|:...|:..::...|| .:.|.|.|:::
  Fly   259 -AQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLG-GQLLRVGRSIT 305

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	17/70 (24%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	23/84 (27%)
hfp	NP_525123.2	half-pint	10..637	CDD:130706	46/179 (26%)
		RRM1_PUF60	130..205	CDD:240816	18/73 (25%)
		RRM2_PUF60	227..303	CDD:240817	21/79 (27%)
		RRM3_UHM_PUF60	536..636	CDD:241092
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439565
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840