Protein Alignment CG4612 and Elavl1

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001102318.1
• Gene: Elavl1 / 363854
• RGDID: 1308649
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 279
• Identity: 73/279 - (26%)
• Similarity: 111/279 - (39%)
• Gaps: 72/279 - (25%)

  Fly    69 GHNSLGSGHTS--TSSHSANVGVGVGGGALASGSTGGSGGNSSPD---SGKIYIKNLERSIDNKA 128
            || |||.|..:  |:..:......:.|..|.|.:...|....|.:   ...:||..|.|::..|.
  Rat    58 GH-SLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKD 121

  Fly   129 VYDTFSVFGNILNCNVAKDE-DGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVH-------- 184
            |.|.||.||.|:|..|..|: .|.|||..|:.||....|..||...||        |
  Rat   122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG--------HKPPGSSEP 178

  Fly   185 -VVKFI--PRRDRE-------------------QEKATHFK------------------------ 203
             .|||.  |.:::.                   ..:|..|:
  Rat   179 ITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSG 243

  Fly   204 -NLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLD-EEGRSRRFGFVAYENPQSALAAVIGLHGK 266
             .:::.||.::..|..|.:||.|:|.:|:.|::.| ...:.:.||||...|.:.|..|:..|:|.
  Rat   244 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 308

  Fly   267 QLGDNKFLYVARALSKAER 285
            :||| |.|.|:...:|:.:
  Rat   309 RLGD-KILQVSFKTNKSHK 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	28/79 (35%)
		RRM3_I_PABPs	202..282	CDD:240826	27/105 (26%)
Elavl1	NP_001102318.1	ELAV_HUD_SF	19..326	CDD:273741	73/277 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910